RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 PSTPIP1O43586 416 aa12.21□□□□□ -0.46
HDAC4-210ENST00000493582 DKC1O60832 514 aaKnown RBP eCLIP12.21□□□□□ -0.465e-7■■■■■ 34.7
HDAC4-210ENST00000493582 ADRB2P07550 413 aa12.21□□□□□ -0.46
HDAC4-210ENST00000493582 CYP3A4P08684 503 aa12.21□□□□□ -0.46
HDAC4-210ENST00000493582 GPSM2P81274 684 aa12.21□□□□□ -0.46
HDAC4-210ENST00000493582 PTP4A2Q12974 167 aa12.21□□□□□ -0.46
HDAC4-210ENST00000493582 SNAPC2Q13487 334 aa12.21□□□□□ -0.46
HDAC4-210ENST00000493582 SH2D5Q6ZV89 423 aa12.21□□□□□ -0.46
HDAC4-210ENST00000493582 NCCRP1Q6ZVX7 275 aaPredicted RBP12.21□□□□□ -0.46
HDAC4-210ENST00000493582 CBWD2Q8IUF1 395 aa12.21□□□□□ -0.46
HDAC4-210ENST00000493582 IGDCC3Q8IVU1 814 aa12.21□□□□□ -0.46
HDAC4-210ENST00000493582 XXYLT1Q8NBI6 393 aa12.21□□□□□ -0.46
HDAC4-210ENST00000493582 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.21□□□□□ -0.46
HDAC4-210ENST00000493582 FNDC8Q8TC99 324 aa12.21□□□□□ -0.46
HDAC4-210ENST00000493582 PFDN4Q9NQP4 134 aa12.21□□□□□ -0.46
HDAC4-210ENST00000493582 TMOD2Q9NZR1 351 aa12.21□□□□□ -0.46
HDAC4-210ENST00000493582 DMTF1Q9Y222 760 aa12.21□□□□□ -0.46
HDAC4-210ENST00000493582 MAD1L1Q9Y6D9 718 aa12.21□□□□□ -0.46
HDAC4-210ENST00000493582 SRCAPQ6ZRS2 3230 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 COPEO14579 308 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 GDF10P55107 478 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 KBTBD12Q3ZCT8 623 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 HSP90AA5PQ58FG0 334 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 CIAPIN1Q6FI81 312 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 ZCCHC23Q6ZST2 131 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 OTOP1Q7RTM1 612 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 TRMT1LQ7Z2T5 733 aaKnown RBP12.2□□□□□ -0.46
HDAC4-210ENST00000493582 CPT1BQ92523 772 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 E2F7Q96AV8 911 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 SH2D3AQ9BRG2 576 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 TSPYL2Q9H2G4 693 aaPredicted RBP12.2□□□□□ -0.46
HDAC4-210ENST00000493582 C17orf75Q9HAS0 396 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.2□□□□□ -0.46
HDAC4-210ENST00000493582 PACSIN3Q9UKS6 424 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 POMPQ9Y244 141 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 ZNF652Q9Y2D9 606 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 NAV1Q8NEY1 1877 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 IGKV6D-41A0A0C4DH26 115 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 LOC100653049A0A140TA62 436 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 RBM47A0AV96 593 aaKnown RBP12.2□□□□□ -0.46
HDAC4-210ENST00000493582 KRT34O76011 436 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 NSFP46459 744 aaKnown RBP12.2□□□□□ -0.46
HDAC4-210ENST00000493582 ALDH1A3P47895 512 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 VCPP55072 806 aaKnown RBP12.2□□□□□ -0.46
HDAC4-210ENST00000493582 XIAPP98170 497 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 AP3B2Q13367 1082 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 FAM81BQ96LP2 452 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 IQANK1A0A1B0GTG1 560 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 A0A1B0GTW7 788 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 TLR3O15455 904 aaKnown RBP12.2□□□□□ -0.46
HDAC4-210ENST00000493582 TRPA1O75762 1119 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 SERPINA6P08185 405 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 DSG3P32926 999 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 STT3AP46977 705 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 CD97P48960 835 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 DYNLT1P63172 113 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 MYBPC1Q00872 1141 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 SLC18A2Q05940 514 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 TXNRD3NBQ6F5E7 133 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 CLEC4GQ6UXB4 293 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 NUP93Q8N1F7 819 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 MARVELD2Q8N4S9 558 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 TTC13Q8NBP0 860 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 PPP1R14BQ96C90 147 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 DCUN1D1Q96GG9 259 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 BTBD9Q96Q07 612 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 APOL6Q9BWW8 343 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 STRA6Q9BX79 667 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 AVENQ9NQS1 362 aaPredicted RBP12.2□□□□□ -0.46
HDAC4-210ENST00000493582 FETUBQ9UGM5 382 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
HDAC4-210ENST00000493582 MYPNQ86TC9 1320 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 IRS2Q9Y4H2 1338 aa12.2□□□□□ -0.46
HDAC4-210ENST00000493582 H3BNX3 289 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 KRT1P04264 644 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 INHBAP08476 426 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 SRGAP2CP0DJJ0 459 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 SRGAP2BP0DMP2 458 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 SREBF1P36956 1147 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 CCR3P51677 355 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 NRLP54845 237 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 MAMLD1Q13495 774 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 OASLQ15646 514 aaKnown RBP12.19□□□□□ -0.46
HDAC4-210ENST00000493582 CNGA3Q16281 694 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 ZNF410Q86VK4 478 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 LRRC43Q8N309 656 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 C7orf26Q96N11 449 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 NT5C1BQ96P26 610 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 SLITRK1Q96PX8 696 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 CSRNP1Q96S65 589 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 SETDB2Q96T68 719 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 MMP19Q99542 508 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 GLT8D2Q9H1C3 349 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 RAB20Q9NX57 234 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 CDH22Q9UJ99 828 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 SERPINA10Q9UK55 444 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 FAF1Q9UNN5 650 aaPredicted RBP12.19□□□□□ -0.46
HDAC4-210ENST00000493582 SNCAIPQ9Y6H5 919 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 IVNS1ABPQ9Y6Y0 642 aa12.19□□□□□ -0.46
HDAC4-210ENST00000493582 UBE4BO95155 1302 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms