RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 UBA3Q8TBC4 463 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 SLC20A1Q8WUM9 679 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 SLC35F5Q8WV83 523 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 KCTD13Q8WZ19 329 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 SECISBP2LQ93073 1101 aaKnown RBP12.21□□□□□ -0.45
LSM2-214ENST00000493387 PDLIM2Q96JY6 352 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 CCDC42Q96M95 316 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 SMOQ99835 787 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 SYT11Q9BT88 431 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 DEF6Q9H4E7 631 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 IGFLR1Q9H665 355 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 SEPT11Q9NVA2 429 aaKnown RBP12.21□□□□□ -0.45
LSM2-214ENST00000493387 MTMR10Q9NXD2 777 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 YIPF1Q9Y548 306 aa12.21□□□□□ -0.45
LSM2-214ENST00000493387 COL4A4P53420 1690 aaPredicted RBP12.21□□□□□ -0.45
LSM2-214ENST00000493387 RTN3O95197 1032 aaPredicted RBP12.2□□□□□ -0.46
LSM2-214ENST00000493387 PAPLNO95428 1278 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 CYP1A1P04798 512 aaPredicted RBP12.2□□□□□ -0.46
LSM2-214ENST00000493387 GZMAP12544 262 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 FOSL2P15408 326 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 GPD2P43304 727 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 GOLGA8FQ08AF8 430 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 GOLGA8DPQ0D2H9 430 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 TWF1Q12792 350 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 ADAM15Q13444 863 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 TAF12Q16514 161 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 DDR2Q16832 855 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 LLGL2Q6P1M3 1020 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 Q7L0L9 218 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 CCDC186Q7Z3E2 898 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 PIGZQ86VD9 579 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 CCDC170Q8IYT3 715 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 NUP93Q8N1F7 819 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 TTC9BQ8N6N2 239 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 CCDC112Q8NEF3 446 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 MYLIPQ8WY64 445 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 ZNF512Q96ME7 567 aaPredicted RBP12.2□□□□□ -0.46
LSM2-214ENST00000493387 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.2□□□□□ -0.46
LSM2-214ENST00000493387 RHOBTB2Q9BYZ6 727 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 CRISPLD1Q9H336 500 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 FBXO44Q9H4M3 255 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 SFXN1Q9H9B4 322 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 LRRC4Q9HBW1 653 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 ARHGAP20Q9P2F6 1191 aa12.2□□□□□ -0.46
LSM2-214ENST00000493387 PRRC2BQ5JSZ5 2229 aaKnown RBP12.19□□□□□ -0.46
LSM2-214ENST00000493387 AKR1B10O60218 316 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 FGF19O95750 216 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 PTMAP06454 111 aaKnown RBP12.19□□□□□ -0.46
LSM2-214ENST00000493387 CYLC1P35663 651 aaPredicted RBP12.19□□□□□ -0.46
LSM2-214ENST00000493387 EIF4A3P38919 411 aaKnown RBP12.19□□□□□ -0.46
LSM2-214ENST00000493387 NSFP46459 744 aaKnown RBP12.19□□□□□ -0.46
LSM2-214ENST00000493387 RPL34P49207 117 aaKnown RBP12.19□□□□□ -0.46
LSM2-214ENST00000493387 NOMO3P69849 1222 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 COL19A1Q14993 1142 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 CLEC16AQ2KHT3 1053 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 CTC1Q2NKJ3 1217 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 ANKRD54Q6NXT1 300 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 DENND5BQ6ZUT9 1274 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 ERICH1Q86X53 443 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 GPIHBP1Q8IV16 184 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 PASD1Q8IV76 773 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 MICALL1Q8N3F8 863 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 LEMD2Q8NC56 503 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 ZMIZ2Q8NF64 920 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 SLC30A5Q8TAD4 765 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 IPO4Q8TEX9 1081 aaKnown RBP12.19□□□□□ -0.46
LSM2-214ENST00000493387 PABPC5Q96DU9 382 aaKnown RBP12.19□□□□□ -0.46
LSM2-214ENST00000493387 GUCD1Q96NT3 240 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 KCNK16Q96T55 309 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 BAG1Q99933 345 aaPredicted RBP12.19□□□□□ -0.46
LSM2-214ENST00000493387 SLC4A5Q9BY07 1137 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 PRKD2Q9BZL6 878 aa12.19□□□□□ -0.46
LSM2-214ENST00000493387 NHEJ1Q9H9Q4 299 aaPredicted RBP12.19□□□□□ -0.46
LSM2-214ENST00000493387 UXTQ9UBK9 157 aaPredicted RBP12.19□□□□□ -0.46
LSM2-214ENST00000493387 MTCL1Q9Y4B5 1905 aaKnown RBP12.18□□□□□ -0.46
LSM2-214ENST00000493387 CCDC195A0A1B0GUA6 201 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 SLC38A8A6NNN8 435 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 HHLA1C9JL84 531 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 DDX3XO00571 662 aaKnown RBP eCLIP12.18□□□□□ -0.469e-11■■□□□ 12.7
LSM2-214ENST00000493387 SART1O43290 800 aaKnown RBP12.18□□□□□ -0.46
LSM2-214ENST00000493387 SOAT2O75908 522 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 BEST1O76090 585 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 FBXO21O94952 628 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 UNGP13051 313 aaPredicted RBP12.18□□□□□ -0.46
LSM2-214ENST00000493387 ATF6P18850 670 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 YWHAQP27348 245 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 SSTR3P32745 418 aaPredicted RBP12.18□□□□□ -0.46
LSM2-214ENST00000493387 GTF2F1P35269 517 aaKnown RBP eCLIP12.18□□□□□ -0.46
LSM2-214ENST00000493387 PPP3CCP48454 512 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 CDR1P51861 262 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 KIF11P52732 1056 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 CACNA2D1P54289 1103 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 CENPCQ03188 943 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 PDCLQ13371 301 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 SLC18A3Q16572 532 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 RAB41Q5JT25 222 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 C10orf76Q5T2E6 689 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 NAA35Q5VZE5 725 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 ACAD10Q6JQN1 1059 aa12.18□□□□□ -0.46
LSM2-214ENST00000493387 PMF1Q6P1K2 205 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms