RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 CRY1Q16526 586 aa22.96■■□□□ 1.27
PFDN4-205ENST00000493356 C8orf34Q49A92 452 aa22.96■■□□□ 1.27
PFDN4-205ENST00000493356 LARP1BQ659C4 914 aaKnown RBP22.96■■□□□ 1.27
PFDN4-205ENST00000493356 VSTM1Q6UX27 236 aa22.96■■□□□ 1.27
PFDN4-205ENST00000493356 LIMS2Q7Z4I7 341 aa22.96■■□□□ 1.27
PFDN4-205ENST00000493356 CCDC33Q8N5R6 958 aa22.96■■□□□ 1.27
PFDN4-205ENST00000493356 KBTBD7Q8WVZ9 684 aa22.96■■□□□ 1.27
PFDN4-205ENST00000493356 MYLPFQ96A32 169 aa22.96■■□□□ 1.27
PFDN4-205ENST00000493356 SYT15Q9BQS2 421 aa22.96■■□□□ 1.27
PFDN4-205ENST00000493356 OLFML3Q9NRN5 406 aa22.96■■□□□ 1.27
PFDN4-205ENST00000493356 MAGEC2Q9UBF1 373 aaPredicted RBP22.96■■□□□ 1.27
PFDN4-205ENST00000493356 ZMIZ1Q9ULJ6 1067 aa22.96■■□□□ 1.27
PFDN4-205ENST00000493356 SMC3Q9UQE7 1217 aa22.96■■□□□ 1.27
PFDN4-205ENST00000493356 LEFTY2O00292 366 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 CYP17A1P05093 508 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 TMEM191BP0C7N4 346 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 PFKLP17858 780 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 SPINK2P20155 84 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 LMO2P25791 158 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 DHPSP49366 369 aaPredicted RBP22.95■■□□□ 1.26
PFDN4-205ENST00000493356 USP46P62068 366 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 IRX4P78413 519 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 ERICH6BQ5W0A0 696 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 DPH6Q7L8W6 267 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 SYCP3Q8IZU3 236 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 OLIG1Q8TAK6 271 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 NOC3LQ8WTT2 800 aaKnown RBP22.95■■□□□ 1.26
PFDN4-205ENST00000493356 CEP295NLQ96MC4 621 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 TMEM121BQ9BXQ6 578 aaPredicted RBP22.95■■□□□ 1.26
PFDN4-205ENST00000493356 CRTAC1Q9NQ79 661 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 TRPM5Q9NZQ8 1165 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 CCDC39Q9UFE4 941 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 CDH9Q9ULB4 789 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 TNRC6BQ9UPQ9 1833 aaKnown RBP22.95■■□□□ 1.26
PFDN4-205ENST00000493356 PCDHB13Q9Y5F0 798 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 BAHCC1Q9P281 2608 aa22.95■■□□□ 1.26
PFDN4-205ENST00000493356 TOP3BO95985 862 aaKnown RBP22.94■■□□□ 1.26
PFDN4-205ENST00000493356 HNRNPLP14866 589 aaKnown RBP eCLIP22.94■■□□□ 1.26
PFDN4-205ENST00000493356 BDNFP23560 247 aa22.94■■□□□ 1.26
PFDN4-205ENST00000493356 MRPS21P82921 87 aaKnown RBP22.94■■□□□ 1.26
PFDN4-205ENST00000493356 MYO1EQ12965 1108 aa22.94■■□□□ 1.26
PFDN4-205ENST00000493356 LMBRD2Q68DH5 695 aaPredicted RBP22.94■■□□□ 1.26
PFDN4-205ENST00000493356 TMEM92Q6UXU6 159 aa22.94■■□□□ 1.26
PFDN4-205ENST00000493356 DENND5BQ6ZUT9 1274 aa22.94■■□□□ 1.26
PFDN4-205ENST00000493356 FILIP1Q7Z7B0 1213 aa22.94■■□□□ 1.26
PFDN4-205ENST00000493356 TTC30AQ86WT1 665 aa22.94■■□□□ 1.26
PFDN4-205ENST00000493356 KDF1Q8NAX2 398 aaPredicted RBP22.94■■□□□ 1.26
PFDN4-205ENST00000493356 PIGKQ92643 395 aa22.94■■□□□ 1.26
PFDN4-205ENST00000493356 FGFBP2Q9BYJ0 223 aa22.94■■□□□ 1.26
PFDN4-205ENST00000493356 ADAM33Q9BZ11 813 aa22.94■■□□□ 1.26
PFDN4-205ENST00000493356 PCIF1Q9H4Z3 704 aa22.94■■□□□ 1.26
PFDN4-205ENST00000493356 INTS13Q9NVM9 706 aa22.94■■□□□ 1.26
PFDN4-205ENST00000493356 GON4LQ3T8J9 2241 aa22.93■■□□□ 1.26
PFDN4-205ENST00000493356 PTPRJQ12913 1337 aa22.93■■□□□ 1.26
PFDN4-205ENST00000493356 CHRM1P11229 460 aaPredicted RBP22.93■■□□□ 1.26
PFDN4-205ENST00000493356 GRIK1P39086 918 aa22.93■■□□□ 1.26
PFDN4-205ENST00000493356 SLC7A9P82251 487 aa22.93■■□□□ 1.26
PFDN4-205ENST00000493356 ALCAMQ13740 583 aa22.93■■□□□ 1.26
PFDN4-205ENST00000493356 MAPRE1Q15691 268 aaKnown RBP22.93■■□□□ 1.26
PFDN4-205ENST00000493356 RRAGBQ5VZM2 374 aa22.93■■□□□ 1.26
PFDN4-205ENST00000493356 SV2BQ7L1I2 683 aa22.93■■□□□ 1.26
PFDN4-205ENST00000493356 SFTPA1Q8IWL2 248 aa22.93■■□□□ 1.26
PFDN4-205ENST00000493356 ADGRG2Q8IZP9 1017 aa22.93■■□□□ 1.26
PFDN4-205ENST00000493356 KIAA1958Q8N8K9 716 aa22.93■■□□□ 1.26
PFDN4-205ENST00000493356 OR5B17Q8NGF7 314 aa22.93■■□□□ 1.26
PFDN4-205ENST00000493356 HPDLQ96IR7 371 aa22.93■■□□□ 1.26
PFDN4-205ENST00000493356 ANKRD36BP1Q96IX9 119 aa22.93■■□□□ 1.26
PFDN4-205ENST00000493356 TTLL2Q9BWV7 592 aa22.93■■□□□ 1.26
PFDN4-205ENST00000493356 RNF38Q9H0F5 515 aa22.93■■□□□ 1.26
PFDN4-205ENST00000493356 EVLQ9UI08 416 aaPredicted RBP22.93■■□□□ 1.26
PFDN4-205ENST00000493356 R3HCC1Q9Y3T6 440 aaKnown RBP22.93■■□□□ 1.26
PFDN4-205ENST00000493356 MYOFQ9NZM1 2061 aa22.93■■□□□ 1.26
PFDN4-205ENST00000493356 PKD1L2Q7Z442 2459 aa22.92■■□□□ 1.26
PFDN4-205ENST00000493356 ZNF840PA6NDX5 716 aa22.92■■□□□ 1.26
PFDN4-205ENST00000493356 ALDH1A2O94788 518 aa22.92■■□□□ 1.26
PFDN4-205ENST00000493356 IDEP14735 1019 aa22.92■■□□□ 1.26
PFDN4-205ENST00000493356 PI4KAP42356 2102 aa22.92■■□□□ 1.26
PFDN4-205ENST00000493356 CYP27A1Q02318 531 aa22.92■■□□□ 1.26
PFDN4-205ENST00000493356 MESP2Q0VG99 397 aa22.92■■□□□ 1.26
PFDN4-205ENST00000493356 DHCR24Q15392 516 aa22.92■■□□□ 1.26
PFDN4-205ENST00000493356 UAP1L1Q3KQV9 507 aa22.92■■□□□ 1.26
PFDN4-205ENST00000493356 GPD1LQ8N335 351 aa22.92■■□□□ 1.26
PFDN4-205ENST00000493356 ALLCQ8N6M5 410 aa22.92■■□□□ 1.26
PFDN4-205ENST00000493356 FBXO2Q9UK22 296 aaPredicted RBP22.92■■□□□ 1.26
PFDN4-205ENST00000493356 CPQQ9Y646 472 aa22.92■■□□□ 1.26
PFDN4-205ENST00000493356 CLIC4Q9Y696 253 aa22.92■■□□□ 1.26
PFDN4-205ENST00000493356 PLXND1Q9Y4D7 1925 aa22.92■■□□□ 1.26
PFDN4-205ENST00000493356 FRMD3A2A2Y4 597 aa22.91■■□□□ 1.26
PFDN4-205ENST00000493356 OLFM2O95897 454 aa22.91■■□□□ 1.26
PFDN4-205ENST00000493356 ANXA13P27216 316 aa22.91■■□□□ 1.26
PFDN4-205ENST00000493356 P2RY2P41231 377 aa22.91■■□□□ 1.26
PFDN4-205ENST00000493356 SLC6A11P48066 632 aa22.91■■□□□ 1.26
PFDN4-205ENST00000493356 IL17RCQ8NAC3 791 aa22.91■■□□□ 1.26
PFDN4-205ENST00000493356 TXNDC5Q8NBS9 432 aaKnown RBP22.91■■□□□ 1.26
PFDN4-205ENST00000493356 DEFB124Q8NES8 71 aa22.91■■□□□ 1.26
PFDN4-205ENST00000493356 RLN3Q8WXF3 142 aa22.91■■□□□ 1.26
PFDN4-205ENST00000493356 PCED1BQ96HM7 432 aa22.91■■□□□ 1.26
PFDN4-205ENST00000493356 FNBP1Q96RU3 617 aa22.91■■□□□ 1.26
PFDN4-205ENST00000493356 PNKPQ96T60 521 aa22.91■■□□□ 1.26
PFDN4-205ENST00000493356 SMPD4Q9NXE4 827 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms