RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 MBTPS1Q14703 1052 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 LLGL1Q15334 1064 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 UPP1Q16831 310 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 MFSD7Q6UXD7 560 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 SPOCD1Q6ZMY3 1216 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 CCDC105Q8IYK2 499 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 URGCPQ8TCY9 931 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 C1orf54Q8WWF1 131 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 RXFP2Q8WXD0 754 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 SLCO2A1Q92959 643 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 HSFY1Q96LI6 401 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 GDAP1L1Q96MZ0 367 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 HNRNPABQ99729 332 aaKnown RBP9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 NCAPGQ9BPX3 1015 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 LPIN3Q9BQK8 851 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 SYT15Q9BQS2 421 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 ERP44Q9BS26 406 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 HERPUD2Q9BSE4 406 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 MED10Q9BTT4 135 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 FTHL17Q9BXU8 183 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 DCLK3Q9C098 648 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 UNC93B1Q9H1C4 597 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 DPH5Q9H2P9 285 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 ZWILCHQ9H900 591 aa9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 DDX43Q9NXZ2 648 aaKnown RBP9.61□□□□□ -0.87
SMARCC1-208ENST00000492896 hCG_1818297A0A087WSY0 165 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 C9IYK1 514 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 PAPSS1O43252 624 aaPredicted RBP9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 TJP3O95049 919 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 EOMESO95936 686 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 PDGFRAP16234 1089 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 NPR3P17342 541 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 PCSK1P29120 753 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 OAS2P29728 719 aaKnown RBP9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 ECHS1P30084 290 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 MIPP30301 263 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 SDC4P31431 198 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 PCK1P35558 622 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 FLT3P36888 993 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 RPL34P49207 117 aaKnown RBP9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 PPP1R7Q15435 360 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 ATP13A4Q4VNC1 1196 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 TFDP3Q5H9I0 405 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 MDH1BQ5I0G3 518 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 DUPD1Q68J44 220 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 TXNRD3NBQ6F5E7 133 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 TRNP1Q6NT89 227 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 GLB1LQ6UWU2 654 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 SYDE1Q6ZW31 735 aaPredicted RBP9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 SLC24A5Q71RS6 500 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 SLC26A9Q7LBE3 791 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 METTL23Q86XA0 190 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 DDX42Q86XP3 938 aaKnown RBP eCLIP9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 FAM126BQ8IXS8 530 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 FUKQ8N0W3 1084 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 MREGQ8N565 214 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 C3orf58Q8NDZ4 430 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 LINC01599Q8WXQ3 324 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 ACSF2Q96CM8 615 aaPredicted RBP9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 PIWIL1Q96J94 861 aaKnown RBP9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 CCDC114Q96M63 670 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 BEGAINQ9BUH8 593 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 HEMGNQ9BXL5 484 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 DUSP16Q9BY84 665 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 TRIM31Q9BZY9 425 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 PAK6Q9NQU5 681 aaPredicted RBP9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 CHST7Q9NS84 486 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 DSEQ9UL01 958 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 CDH9Q9ULB4 789 aa9.6□□□□□ -0.87
SMARCC1-208ENST00000492896 FNDC1Q4ZHG4 1894 aaPredicted RBP9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 VWA8A3KMH1 1905 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 HSF2BPO75031 334 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 ATP2C2O75185 946 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 GRAP2O75791 330 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 GABBR2O75899 941 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 B3GAT3O94766 335 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 TRUB2O95900 331 aaKnown RBP9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 GAS8O95995 478 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 CYP11A1P05108 521 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 FAM153BP0C7A2 387 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 FAM200BP0CF97 657 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 LCP1P13796 627 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 IGFBP6P24592 240 aaPredicted RBP9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 IL1R2P27930 398 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 CDKN2BP42772 138 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 KCNJ1P48048 391 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 CDK7P50613 346 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 DRG2P55039 364 aaKnown RBP9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 CBX1P83916 185 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 PLCB3Q01970 1234 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 KRT17Q04695 432 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 SNX1Q13596 522 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 PTK6Q13882 451 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 TRADDQ15628 312 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 CCNG2Q16589 344 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 CDO1Q16878 200 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 C15orf59Q2T9L4 293 aaPredicted RBP9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 SMTNL2Q2TAL5 461 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 FAM153CQ494X1 144 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 TIGD5Q53EQ6 642 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms