RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 GPR152Q8TDT2 470 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TSPEARQ8WU66 669 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 GATAD2BQ8WXI9 593 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 IP6K1Q92551 441 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PEX13Q92968 403 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ZNF566Q969W8 418 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 SLC22A18Q96BI1 424 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 DTNBP1Q96EV8 351 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CALML4Q96GE6 196 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 SNF8Q96H20 258 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 MYO19Q96H55 970 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 FAM20AQ96MK3 541 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CAMK1GQ96NX5 476 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CCT7Q99832 543 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PDCD2LQ9BRP1 358 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 THUMPD3Q9BV44 507 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 STRA6Q9BX79 667 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 MOV10L1Q9BXT6 1211 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ITPAQ9BY32 194 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TRIM4Q9C037 500 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 KCNH6Q9H252 994 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 RHBGQ9H310 441 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PRDM13Q9H4Q3 707 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 OPA3Q9H6K4 179 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 SPACA1Q9HBV2 294 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 EMC7Q9NPA0 242 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 FAM114A2Q9NRY5 505 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 AGPAT3Q9NRZ7 376 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 FARSBQ9NSD9 589 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 HESX1Q9UBX0 185 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 HMGXB4Q9UGU5 601 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 NDOR1Q9UHB4 597 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 FBXL21Q9UKT6 434 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CNOT11Q9UKZ1 510 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 SNX6Q9UNH7 406 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 STX8Q9UNK0 236 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 GAB2Q9UQC2 676 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 EXOC6BQ9Y2D4 811 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 USP20Q9Y2K6 914 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 DERAQ9Y315 318 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 GPSM3Q9Y4H4 160 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PCDHB2Q9Y5E7 798 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TRPV2Q9Y5S1 764 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ROBO2Q9HCK4 1378 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 MYPNQ86TC9 1320 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TRAV20A0A0B4J274 112 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 POM121BA6NF01 834 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 E9PMD0 336 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 H3BML4 177 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CXCL11O14625 94 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 DVL2O14641 736 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PSMA7O14818 248 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 SCAMP1O15126 338 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CASC3O15234 703 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TP73O15350 636 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 KRT86O43790 486 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PEX1O43933 1283 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TBC1D4O60343 1298 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 EXOC3O60645 756 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 KLHL18O94889 574 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 SCAF4O95104 1147 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PRAMEF12O95522 483 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CRTAMO95727 393 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PNPP00491 289 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 HLA-DRAP01903 254 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 THP07101 528 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 GHRP10912 638 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ACADMP11310 421 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 GCFC2P16383 781 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TSHRP16473 764 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 RHOQP17081 205 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TYMPP19971 482 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 RFC2P35250 354 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 SERPINF1P36955 418 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ACADSBP45954 432 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 NT5C2P49902 561 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 EPHA4P54764 986 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 MFAP3P55082 362 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ADARP55265 1226 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 POLR2GP62487 172 aaKnown RBP eCLIP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ELP6Q0PNE2 266 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 HSPA14Q0VDF9 509 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ASPHQ12797 758 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CHAF1BQ13112 559 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 MORF4L2Q15014 288 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CNN3Q15417 329 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 PCSK7Q16549 785 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 KCTD21Q4G0X4 260 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 FAM26FQ5R3K3 315 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TMTC4Q5T4D3 741 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 LCE2AQ5TA79 106 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ATPAF1Q5TC12 328 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 CAVIN1Q6NZI2 390 aaKnown RBP4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ERICH5Q6P6B1 374 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TPTE2Q6XPS3 522 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 KDM7AQ6ZMT4 941 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 TMTC3Q6ZXV5 915 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ARHGAP22Q7Z5H3 698 aa4.44□□□□□ -1.7
BRCA1-220ENST00000492859 ADCK1Q86TW2 530 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms