RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ZCCHC14Q8WYQ9 949 aaKnown RBP14.19□□□□□ -0.14
USF1-206ENST00000491629 RNF38Q9H0F5 515 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 FSCN3Q9NQT6 498 aa14.19□□□□□ -0.14
USF1-206ENST00000491629 ATXN2Q99700 1313 aaKnown RBP14.18□□□□□ -0.14
USF1-206ENST00000491629 SPAARA0A1B0GVQ0 90 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 LEFTY2O00292 366 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 SCAMP3O14828 347 aaKnown RBP14.18□□□□□ -0.14
USF1-206ENST00000491629 ADAM23O75077 832 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 IL18RAPO95256 599 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 HDCP19113 662 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 LMO2P25791 158 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 TFAMQ00059 246 aaKnown RBP14.18□□□□□ -0.14
USF1-206ENST00000491629 SOWAHAQ2M3V2 549 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 MAP7D1Q3KQU3 841 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 SLFN12LQ6IEE8 588 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 LRSAM1Q6UWE0 723 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 C11orf74Q86VG3 221 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 SFR1Q86XK3 245 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 NT5DC4Q86YG4 428 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 BRSK2Q8IWQ3 736 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 SCN4BQ8IWT1 228 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 ADGRG2Q8IZP9 1017 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 TMEM86AQ8N2M4 240 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 POMGNT1Q8WZA1 660 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 SAAL1Q96ER3 474 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 AK8Q96MA6 479 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 CRTAC1Q9NQ79 661 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 GDAP2Q9NXN4 497 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 NEUROG3Q9Y4Z2 214 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 KNL1Q8NG31 2342 aa14.18□□□□□ -0.14
USF1-206ENST00000491629 PTPRJQ12913 1337 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 TNFRSF10BO14763 440 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 SLC26A4O43511 780 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 HUS1O60921 280 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 KLF8O95600 359 aaPredicted RBP14.17□□□□□ -0.14
USF1-206ENST00000491629 NFATC1O95644 943 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 KRT18P05783 430 aaKnown RBP14.17□□□□□ -0.14
USF1-206ENST00000491629 ENGP17813 658 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 UBA7P41226 1012 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 PNPLA4P41247 253 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 MAGEA11P43364 429 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 KIR2DL1P43626 348 aaPredicted RBP14.17□□□□□ -0.14
USF1-206ENST00000491629 MAPK8P45983 427 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 NR1H3Q13133 447 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 SEMA3BQ13214 749 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 PEAR1Q5VY43 1037 aaPredicted RBP14.17□□□□□ -0.14
USF1-206ENST00000491629 RHBDF2Q6PJF5 856 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 USP49Q70CQ1 688 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 FILIP1Q7Z7B0 1213 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 TTC30AQ86WT1 665 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 PHTF2Q8N3S3 785 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 TXNDC5Q8NBS9 432 aaKnown RBP14.17□□□□□ -0.14
USF1-206ENST00000491629 KBTBD7Q8WVZ9 684 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 LARP4BQ92615 738 aaKnown RBP14.17□□□□□ -0.14
USF1-206ENST00000491629 EXOC4Q96A65 974 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 CALML4Q96GE6 196 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 FUBP3Q96I24 572 aaKnown RBP eCLIP14.17□□□□□ -0.14
USF1-206ENST00000491629 FAM213AQ9BRX8 229 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 FGFBP2Q9BYJ0 223 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 TMEM30AQ9NV96 361 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 HCN2Q9UL51 889 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 MSRB2Q9Y3D2 182 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 NME7Q9Y5B8 376 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 SNX9Q9Y5X1 595 aa14.17□□□□□ -0.14
USF1-206ENST00000491629 A0A0A0MRY4 1105 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 TBCAO75347 108 aaKnown RBP14.16□□□□□ -0.14
USF1-206ENST00000491629 OLFM2O95897 454 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 ITPKAP23677 461 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 TIE1P35590 1138 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 CASP5P51878 434 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 PSMC1P62191 440 aaKnown RBP14.16□□□□□ -0.14
USF1-206ENST00000491629 MRPS21P82921 87 aaKnown RBP14.16□□□□□ -0.14
USF1-206ENST00000491629 MYL7Q01449 175 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 KCNB1Q14721 858 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 DHCR24Q15392 516 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 LMBRD2Q68DH5 695 aaPredicted RBP14.16□□□□□ -0.14
USF1-206ENST00000491629 SLC23A3Q6PIS1 610 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 DYMQ7RTS9 669 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 SPATA2LQ8IUW3 424 aaPredicted RBP14.16□□□□□ -0.14
USF1-206ENST00000491629 SYT12Q8IV01 421 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 ADGRF2Q8IZF7 708 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 CSGALNACT2Q8N6G5 542 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 TOP6BLQ8N6T0 577 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 LRRC52Q8N7C0 313 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 MYLPFQ96A32 169 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 SPATA17Q96L03 361 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 TTLL2Q9BWV7 592 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 PDE11AQ9HCR9 933 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 PILRBQ9UKJ0 227 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 LHX6Q9UPM6 363 aa14.16□□□□□ -0.14
USF1-206ENST00000491629 FAM221BA6H8Z2 402 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 GOLGA8IPA6NC78 632 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 ZNF840PA6NDX5 716 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 GOLGA8JA6NMD2 632 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 KAT7O95251 611 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 BDNFP23560 247 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 DDIT3P35638 169 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 CACNA2D1P54289 1103 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 SLC7A9P82251 487 aa14.15□□□□□ -0.14
USF1-206ENST00000491629 ACAP1Q15027 740 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms