RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334		K7ENM7	598 aa		20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	SLC9A3R1	O14745	358 aa	Predicted RBP	20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	HUS1	O60921	280 aa		20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	EIF2D	P41214	584 aa	Known RBP	20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	TNFRSF4	P43489	277 aa		20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	TOB1	P50616	345 aa	Predicted RBP	20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	NEK4	P51957	841 aa		20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	MYL7	Q01449	175 aa		20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	RPL6	Q02878	288 aa	Known RBP	20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	GAB4	Q2WGN9	574 aa		20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	ARSH	Q5FYA8	562 aa		20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	ADAL	Q6DHV7	355 aa		20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	SPATA2L	Q8IUW3	424 aa	Predicted RBP	20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	SCN4B	Q8IWT1	228 aa		20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	ADAMTS14	Q8WXS8	1223 aa		20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	PNMA5	Q96PV4	448 aa		20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	DNAAF2	Q9NVR5	837 aa	Known RBP	20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	KIAA1549L	Q6ZVL6	1849 aa		20.66	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	ASXL3	Q9C0F0	2248 aa		20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	TSC2	P49815	1807 aa		20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	TCRBV21S2A2	A0A5A6	115 aa		20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	LEFTY2	O00292	366 aa		20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	KAT7	O95251	611 aa		20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	GRIA2	P42262	883 aa		20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	SLC6A11	P48066	632 aa		20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	CFAP221	Q4G0U5	840 aa		20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	INTS6L	Q5JSJ4	861 aa	Known RBP	20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	EMC10	Q5UCC4	262 aa		20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	SLC39A4	Q6P5W5	647 aa		20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	CCNI2	Q6ZMN8	369 aa	Predicted RBP	20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	NT5DC4	Q86YG4	428 aa		20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	TMEM86A	Q8N2M4	240 aa		20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	PDCL2	Q8N4E4	241 aa		20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	FUBP3	Q96I24	572 aa	Known RBP eCLIP	20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	LLPH	Q9BRT6	129 aa	Known RBP	20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	AGO2	Q9UKV8	859 aa	Known RBP	20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	SMG1	Q96Q15	3661 aa	Known RBP	20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	LOC400499	M0QZD8	3231 aa		20.65	■□□□□ 0.9
CDK5RAP2-218	ENST00000491334	TRAK2	O60296	914 aa		20.64	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	FAM13A	O94988	1023 aa		20.64	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	CYP17A1	P05093	508 aa		20.64	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	KIR2DL1	P43626	348 aa	Predicted RBP	20.64	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	ZNF33A	Q06730	810 aa		20.64	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	DHCR24	Q15392	516 aa		20.64	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	FILIP1	Q7Z7B0	1213 aa		20.64	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	DEFB119	Q8N690	84 aa		20.64	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	HNRNPLL	Q8WVV9	542 aa	Known RBP	20.64	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	PARVG	Q9HBI0	331 aa		20.64	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	TRPM5	Q9NZQ8	1165 aa		20.64	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	PTPRD	P23468	1912 aa		20.64	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	OBSL1	O75147	1896 aa		20.64	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	APC2	O95996	2303 aa		20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	ANKRD63	C9JTQ0	380 aa		20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	ZBTB24	O43167	697 aa	Predicted RBP	20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	SH3BP5	O60239	455 aa		20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	IL18RAP	O95256	599 aa		20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	ACAT1	P24752	427 aa	Known RBP	20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	ATP2C1	P98194	919 aa	Predicted RBP	20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	ST3GAL1	Q11201	340 aa		20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	REST	Q13127	1097 aa		20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	SFTPA1	Q8IWL2	248 aa		20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	FAM184A	Q8NB25	1140 aa		20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	KCNV2	Q8TDN2	545 aa		20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	PKMYT1	Q99640	499 aa		20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	REEP2	Q9BRK0	252 aa		20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	ARHGEF4	Q9NR80	690 aa		20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	APOBEC2	Q9Y235	224 aa	Known RBP	20.63	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	ADAM23	O75077	832 aa		20.62	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	ADH1C	P00326	375 aa		20.62	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	FTH1P19	P0C7X4	201 aa		20.62	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	PCSK1	P29120	753 aa		20.62	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	MAGEA11	P43364	429 aa		20.62	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	LHX1	P48742	406 aa		20.62	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	ZXDB	P98169	803 aa		20.62	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	GTF2B	Q00403	316 aa		20.62	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	RHBDF2	Q6PJF5	856 aa		20.62	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	TRMT11	Q7Z4G4	463 aa	Known RBP	20.62	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	CEP295NL	Q96MC4	621 aa		20.62	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	CAMK1G	Q96NX5	476 aa		20.62	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	EHD2	Q9NZN4	543 aa		20.62	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	L1RE1	Q9UN81	338 aa		20.62	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	AGAP1	Q9UPQ3	857 aa		20.62	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	STYXL1	Q9Y6J8	313 aa		20.62	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334		A0A1W2PQD8	194 aa		20.61	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	CHRM1	P11229	460 aa	Predicted RBP	20.61	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	PPP3CC	P48454	512 aa		20.61	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	ZNF131	P52739	623 aa		20.61	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	SLC7A9	P82251	487 aa		20.61	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	HMGN5	P82970	282 aa	Known RBP	20.61	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	MESP2	Q0VG99	397 aa		20.61	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	POSTN	Q15063	836 aa		20.61	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	PREPL	Q4J6C6	727 aa	Predicted RBP	20.61	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	C4orf50	Q6ZRC1	276 aa		20.61	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	NUDT18	Q6ZVK8	323 aa		20.61	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	GPBP1	Q86WP2	473 aa		20.61	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	CCDC83	Q8IWF9	413 aa		20.61	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	PNPLA1	Q8N8W4	532 aa		20.61	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	OR2I1P	Q8NGU4	316 aa		20.61	■□□□□ 0.89
CDK5RAP2-218	ENST00000491334	CACTIN	Q8WUQ7	758 aa	Known RBP	20.61	■□□□□ 0.89

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms