RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 DPEP3Q9H4B8 488 aa14.56□□□□□ -0.08
COL6A3-211ENST00000491233 ECT2Q9H8V3 914 aa14.56□□□□□ -0.08
COL6A3-211ENST00000491233 DUS2Q9NX74 493 aaKnown RBP14.56□□□□□ -0.08
COL6A3-211ENST00000491233 CGNQ9P2M7 1197 aaKnown RBP14.56□□□□□ -0.08
COL6A3-211ENST00000491233 CFAP45Q9UL16 551 aa14.56□□□□□ -0.08
COL6A3-211ENST00000491233 CACNA1AO00555 2505 aa14.56□□□□□ -0.08
COL6A3-211ENST00000491233 SPAG17Q6Q759 2223 aa14.56□□□□□ -0.08
COL6A3-211ENST00000491233 F8VP50 259 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 TRIM66O15016 1216 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 ACTN4O43707 911 aaKnown RBP14.55□□□□□ -0.08
COL6A3-211ENST00000491233 KLRC4O43908 158 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 RNF40O75150 1001 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 CLSTN1O94985 981 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 STAU1O95793 577 aaKnown RBP14.55□□□□□ -0.08
COL6A3-211ENST00000491233 CNR2P34972 360 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 CASP4P49662 377 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 BIRC3Q13489 604 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 EML3Q32P44 896 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 CEP68Q76N32 757 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 WDR5BQ86VZ2 330 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 KIAA0895Q8NCT3 520 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 ATP2A3Q93084 1043 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 SYAP1Q96A49 352 aaPredicted RBP14.55□□□□□ -0.08
COL6A3-211ENST00000491233 CEP295NLQ96MC4 621 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 P2RY13Q9BPV8 354 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 TTLL2Q9BWV7 592 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 ZNF518BQ9C0D4 1074 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 XYLT2Q9H1B5 865 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 FBRSL1Q9HCM7 1045 aaKnown RBP14.55□□□□□ -0.08
COL6A3-211ENST00000491233 EXOC1Q9NV70 894 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 NXF1Q9UBU9 619 aaKnown RBP14.55□□□□□ -0.08
COL6A3-211ENST00000491233 ARHGAP26Q9UNA1 814 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 FRYLO94915 3013 aa14.55□□□□□ -0.08
COL6A3-211ENST00000491233 MYH10P35580 1976 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 A8MXQ7 604 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 PHACTR2O75167 634 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 RETP07949 1114 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 SLFN14P0C7P3 912 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 TCF3P15923 654 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 PTPN1P18031 435 aaKnown RBP14.54□□□□□ -0.08
COL6A3-211ENST00000491233 HDCP19113 662 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 DRD1P21728 446 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 HOXA6P31267 233 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 ATICP31939 592 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 PXNP49023 591 aaPredicted RBP14.54□□□□□ -0.08
COL6A3-211ENST00000491233 PDE6CP51160 858 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 CACNA2D1P54289 1103 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 TDRD10Q5VZ19 366 aaKnown RBP14.54□□□□□ -0.08
COL6A3-211ENST00000491233 GOLGA5Q8TBA6 731 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 C8orf48Q96LL4 319 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 ELOVL4Q9GZR5 314 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 SMYD3Q9H7B4 428 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 TMEM30AQ9NV96 361 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 EHD2Q9NZN4 543 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 TRPM5Q9NZQ8 1165 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 RCOR1Q9UKL0 485 aa14.54□□□□□ -0.08
COL6A3-211ENST00000491233 CDV3Q9UKY7 258 aaKnown RBP14.54□□□□□ -0.08
COL6A3-211ENST00000491233 LRRIQ3A6PVS8 624 aaPredicted RBP14.53□□□□□ -0.08
COL6A3-211ENST00000491233 PRR5-ARHGAP8B1AHC4 643 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 CLDN5O00501 218 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 ATG13O75143 517 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 FAM163BP0C2L3 166 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 PFKFB1P16118 471 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 PFKLP17858 780 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 RAP1GAPP47736 663 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 GALK1P51570 392 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 NOP14P78316 857 aaKnown RBP14.53□□□□□ -0.08
COL6A3-211ENST00000491233 ARHGAP8P85298 464 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 IFRD2Q12894 506 aaPredicted RBP14.53□□□□□ -0.08
COL6A3-211ENST00000491233 STK4Q13043 487 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 ZNF699Q32M78 642 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 KMT5BQ4FZB7 885 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 SCARA5Q6ZMJ2 495 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 FAM160A2Q8N612 972 aaPredicted RBP14.53□□□□□ -0.08
COL6A3-211ENST00000491233 B3GALNT2Q8NCR0 500 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 EZH1Q92800 747 aaPredicted RBP14.53□□□□□ -0.08
COL6A3-211ENST00000491233 CD101Q93033 1021 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 EXOC4Q96A65 974 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 PAGE5Q96GU1 130 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 B3GNT5Q9BYG0 378 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 POLR3BQ9NW08 1133 aaPredicted RBP14.53□□□□□ -0.08
COL6A3-211ENST00000491233 SLC8A2Q9UPR5 921 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.53□□□□□ -0.08
COL6A3-211ENST00000491233 WDR87Q6ZQQ6 2873 aa14.53□□□□□ -0.08
COL6A3-211ENST00000491233 A0A1B0GVL5 298 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 ZNF840PA6NDX5 716 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 LEFTY2O00292 366 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 LRP3O75074 770 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 NFATC1O95644 943 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 ABL1P00519 1130 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 SDHBP21912 280 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 ATXN1P54253 815 aaKnown RBP14.52□□□□□ -0.09
COL6A3-211ENST00000491233 ZXDBP98169 803 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 TAF10Q12962 218 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 NCOA4Q13772 614 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 FBXO43Q4G163 708 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 ZNF667Q5HYK9 610 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 RPLP0P6Q8NHW5 317 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 PARD3BQ8TEW8 1205 aa14.52□□□□□ -0.09
COL6A3-211ENST00000491233 GAB3Q8WWW8 586 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms