RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 RGPD1P0DJD0 1748 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 LAMA4Q16363 1823 aa2.3□□□□□ -2.04
SNRNP40-207ENST00000491106 MYH10P35580 1976 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 MYH8P13535 1937 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 MYH15Q9Y2K3 1946 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 COL11A2P13942 1736 aaPredicted RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 XRN1Q8IZH2 1706 aaKnown RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 DIP2CQ9Y2E4 1556 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 PXDNLA1KZ92 1463 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 OVOS2A0A0J9YW53 1432 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 OVOS2Q6IE36 1432 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 ADGRL3Q9HAR2 1447 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 WDR19Q8NEZ3 1342 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 SH3TC1Q8TE82 1336 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 A0A087X0B3 334 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 CCDC196A0A1B0GTZ2 297 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 A6NNZ2 444 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 GSG1L2A8MUP6 293 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 ERVV-2B6SEH9 535 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 E7EWF7 191 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 CPLX1O14810 134 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 SPTLC2O15270 562 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 PJA2O43164 708 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 CIAO1O76071 339 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 ENDOD1O94919 500 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 LARGE1O95461 756 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 CTDNEP1O95476 244 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 ESRRBO95718 433 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 FGAP02671 866 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 IGKV5-2P06315 115 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 CYP21A2P08686 494 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 IFIT1P09914 478 aaKnown RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 HSPD1P10809 573 aaKnown RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 FDPSP14324 419 aaKnown RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 FDXRP22570 491 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 SLC6A2P23975 617 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 U2AF2P26368 475 aaKnown RBP eCLIP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 SMARCA1P28370 1054 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 CASQ1P31415 396 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 ABCG1P45844 678 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 RFX5P48382 616 aaPredicted RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 SEC24CP53992 1094 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 BLOC1S1P78537 153 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 TFCP2Q12800 502 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 AIMP1Q12904 312 aaKnown RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 LRMPQ12912 555 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 STK3Q13188 491 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 SP140Q13342 867 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 STK38Q15208 465 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 TTF1Q15361 905 aaPredicted RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 ALX1Q15699 326 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 IMMTQ16891 758 aaKnown RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 TUBB8Q3ZCM7 444 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 CCDC157Q569K6 752 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 EPHA10Q5JZY3 1008 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 GJC2Q5T442 439 aaPredicted RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 GORABQ5T7V8 394 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 ANO1Q5XXA6 986 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 FAM173BQ6P4H8 233 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 ZNF530Q6P9A1 599 aaPredicted RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 SYCE2Q6PIF2 218 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 TMCO3Q6UWJ1 677 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 GADL1Q6ZQY3 521 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 HTR3DQ70Z44 454 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 GPRIN1Q7Z2K8 1008 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 KRT28Q7Z3Y7 464 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 DHX40Q8IX18 779 aaKnown RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 RHOT2Q8IXI1 618 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 CEP57L1Q8IYX8 460 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 TRIML1Q8N9V2 468 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 FSIP1Q8NA03 581 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 MLKLQ8NB16 471 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 CCDC191Q8NCU4 936 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 CCDC150Q8NCX0 1101 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 NSUN7Q8NE18 718 aaKnown RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 NLGN4YQ8NFZ3 816 aaPredicted RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 NCOA7Q8NI08 942 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 ASB10Q8WXI3 467 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 MRPS27Q92552 414 aaKnown RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 WASF1Q92558 559 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 SLC9A6Q92581 669 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 CYFIP2Q96F07 1278 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 SUCLG2Q96I99 432 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 C8orf76Q96K31 380 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 CTAGE1Q96RT6 745 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 USP28Q96RU2 1077 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 PNKPQ96T60 521 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 MYOCQ99972 504 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 CPNE5Q9HCH3 593 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 IL17RBQ9NRM6 502 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 MKS1Q9NXB0 559 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 PSD3Q9NYI0 1048 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 ORC3Q9UBD5 711 aaPredicted RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 TUBE1Q9UJT0 475 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 ST3GAL5Q9UNP4 418 aa2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 PA2G4Q9UQ80 394 aaKnown RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 APOBEC2Q9Y235 224 aaKnown RBP2.29□□□□□ -2.04
SNRNP40-207ENST00000491106 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.29□□□□□ -2.047e-10■□□□□ 9.3
SNRNP40-207ENST00000491106 USP16Q9Y5T5 823 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms