RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 USP46P62068 366 aa16.43■□□□□ 0.22
SCAMP3-208ENST00000490999 GTF2BQ00403 316 aa16.43■□□□□ 0.22
SCAMP3-208ENST00000490999 SEMA3BQ13214 749 aa16.43■□□□□ 0.22
SCAMP3-208ENST00000490999 MAP7D1Q3KQU3 841 aa16.43■□□□□ 0.22
SCAMP3-208ENST00000490999 MCTP1Q6DN14 999 aa16.43■□□□□ 0.22
SCAMP3-208ENST00000490999 ADGRF2Q8IZF7 708 aa16.43■□□□□ 0.22
SCAMP3-208ENST00000490999 PGBD3Q8N328 593 aa16.43■□□□□ 0.22
SCAMP3-208ENST00000490999 C1orf127Q8N9H9 656 aa16.43■□□□□ 0.22
SCAMP3-208ENST00000490999 CCDC26Q8TAB7 109 aa16.43■□□□□ 0.22
SCAMP3-208ENST00000490999 ERLEC1Q96DZ1 483 aa16.43■□□□□ 0.22
SCAMP3-208ENST00000490999 SAAL1Q96ER3 474 aa16.43■□□□□ 0.22
SCAMP3-208ENST00000490999 ACBD6Q9BR61 282 aa16.43■□□□□ 0.22
SCAMP3-208ENST00000490999 BLOC1S4Q9NUP1 217 aa16.43■□□□□ 0.22
SCAMP3-208ENST00000490999 TNRC6BQ9UPQ9 1833 aaKnown RBP16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 HUS1O60921 280 aa16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 ADAM23O75077 832 aa16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 ATP2C2O75185 946 aa16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 SEC24BO95487 1268 aa16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 ADSSP30520 456 aa16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 PNPLA4P41247 253 aa16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 MYL7Q01449 175 aa16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 SLC23A3Q6PIS1 610 aa16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 PROSER1Q86XN7 944 aa16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 HDDC3Q8N4P3 179 aa16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 FSIP1Q8NA03 581 aa16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 POMGNT1Q8WZA1 660 aa16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 MYLPFQ96A32 169 aa16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 FAM213AQ9BRX8 229 aa16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 PILRBQ9UKJ0 227 aa16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 SNX9Q9Y5X1 595 aa16.42■□□□□ 0.22
SCAMP3-208ENST00000490999 KAT7O95251 611 aa16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 KRT19P08727 400 aa16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 PLCG1P19174 1290 aa16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 MRPS21P82921 87 aaKnown RBP16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 RPL6Q02878 288 aaKnown RBP16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 RESTQ13127 1097 aa16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 DHCR24Q15392 516 aa16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 CFAP221Q4G0U5 840 aa16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 LMBRD2Q68DH5 695 aaPredicted RBP16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 MINDY1Q8N5J2 469 aa16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 RASSF8Q8NHQ8 419 aa16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 SPATA18Q8TC71 538 aa16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 CAMK1GQ96NX5 476 aa16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 POLMQ9NP87 494 aaPredicted RBP16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 ARHGEF4Q9NR80 690 aa16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 GPSM3Q9Y4H4 160 aa16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 CPQQ9Y646 472 aa16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 STYXL1Q9Y6J8 313 aa16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 PTPRDP23468 1912 aa16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 HELZP42694 1942 aaKnown RBP16.41■□□□□ 0.22
SCAMP3-208ENST00000490999 IL18RAPO95256 599 aa16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 TCF3P15923 654 aa16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 SCP2P22307 547 aa16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 DDIT3P35638 169 aa16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 GRIN1Q05586 938 aa16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 KCNA1Q09470 495 aa16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 SCAPQ12770 1279 aa16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 RILPL1Q5EBL4 403 aa16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 PEAR1Q5VY43 1037 aaPredicted RBP16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 SLFN12LQ6IEE8 588 aa16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 SFR1Q86XK3 245 aa16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 KCTD17Q8N5Z5 321 aa16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 NOC3LQ8WTT2 800 aaKnown RBP16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 RAD54LQ92698 747 aa16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 PNKPQ96T60 521 aa16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 MTMR12Q9C0I1 747 aa16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 CFAP97Q9P2B7 532 aa16.4■□□□□ 0.22
SCAMP3-208ENST00000490999 MYMKA6NI61 221 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 OPHN1O60890 802 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 ABL1P00519 1130 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 APODP05090 189 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 BDNFP23560 247 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 WASP42768 502 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 KIR2DL1P43626 348 aaPredicted RBP16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 GFPT1Q06210 699 aaPredicted RBP16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 COL28A1Q2UY09 1125 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 SOWAHCQ53LP3 525 aaPredicted RBP16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 EOGTQ5NDL2 527 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 RAB44Q7Z6P3 723 aaPredicted RBP16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 BRSK2Q8IWQ3 736 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 TMEM86AQ8N2M4 240 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 CSGALNACT2Q8N6G5 542 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 PNPLA1Q8N8W4 532 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 CXorf38Q8TB03 319 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 CALML4Q96GE6 196 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 FUBP3Q96I24 572 aaKnown RBP eCLIP16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 SYT15Q9BQS2 421 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 RNF38Q9H0F5 515 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 CAPN10Q9HC96 672 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 CRTAC1Q9NQ79 661 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 RBAKQ9NYW8 714 aaPredicted RBP16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 TRPM5Q9NZQ8 1165 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 CALCOCO1Q9P1Z2 691 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 SIX4Q9UIU6 781 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 SLC6A14Q9UN76 642 aa16.39■□□□□ 0.21
SCAMP3-208ENST00000490999 PCDH15Q96QU1 1955 aa16.38■□□□□ 0.21
SCAMP3-208ENST00000490999 GOLGA8IPA6NC78 632 aa16.38■□□□□ 0.21
SCAMP3-208ENST00000490999 GOLGA8JA6NMD2 632 aa16.38■□□□□ 0.21
SCAMP3-208ENST00000490999 ZIC2O95409 532 aaPredicted RBP16.38■□□□□ 0.21
SCAMP3-208ENST00000490999 CAPNS1P04632 268 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms