RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 HNRNPA1P09651 372 aaKnown RBP eCLIP17.02■□□□□ 0.32
CLIC4-203ENST00000489758 SETSIPP0DME0 302 aa17.02■□□□□ 0.32
CLIC4-203ENST00000489758 SKILP12757 684 aa17.02■□□□□ 0.32
CLIC4-203ENST00000489758 CDH5P33151 784 aaPredicted RBP17.02■□□□□ 0.32
CLIC4-203ENST00000489758 RPL10AP62906 217 aaKnown RBP17.02■□□□□ 0.32
CLIC4-203ENST00000489758 KLHL30Q0D2K2 578 aa17.02■□□□□ 0.32
CLIC4-203ENST00000489758 BST2Q10589 180 aaKnown RBP17.02■□□□□ 0.32
CLIC4-203ENST00000489758 PPM1LQ5SGD2 360 aa17.02■□□□□ 0.32
CLIC4-203ENST00000489758 ANKRD54Q6NXT1 300 aa17.02■□□□□ 0.32
CLIC4-203ENST00000489758 SYCE2Q6PIF2 218 aa17.02■□□□□ 0.32
CLIC4-203ENST00000489758 C12orf76Q8N812 135 aaPredicted RBP17.02■□□□□ 0.32
CLIC4-203ENST00000489758 STKLD1Q8NE28 680 aa17.02■□□□□ 0.32
CLIC4-203ENST00000489758 CMASQ8NFW8 434 aaPredicted RBP17.02■□□□□ 0.32
CLIC4-203ENST00000489758 GPR152Q8TDT2 470 aa17.02■□□□□ 0.32
CLIC4-203ENST00000489758 ZNF707Q96C28 371 aaPredicted RBP17.02■□□□□ 0.32
CLIC4-203ENST00000489758 PCDHB18PQ96TA0 734 aa17.02■□□□□ 0.32
CLIC4-203ENST00000489758 AGPAT1Q99943 283 aa17.02■□□□□ 0.32
CLIC4-203ENST00000489758 UBXN6Q9BZV1 441 aa17.02■□□□□ 0.32
CLIC4-203ENST00000489758 SFXN1Q9H9B4 322 aa17.02■□□□□ 0.32
CLIC4-203ENST00000489758 PNPLA8Q9NP80 782 aa17.02■□□□□ 0.32
CLIC4-203ENST00000489758 ARHGAP20Q9P2F6 1191 aa17.02■□□□□ 0.32
CLIC4-203ENST00000489758 CYTH4Q9UIA0 394 aa17.02■□□□□ 0.32
CLIC4-203ENST00000489758 PLXNA3P51805 1871 aa17.01■□□□□ 0.31
CLIC4-203ENST00000489758 GABBR2O75899 941 aa17.01■□□□□ 0.31
CLIC4-203ENST00000489758 SERPING1P05155 500 aa17.01■□□□□ 0.31
CLIC4-203ENST00000489758 PLEKP08567 350 aaPredicted RBP17.01■□□□□ 0.31
CLIC4-203ENST00000489758 SRGAP2BP0DMP2 458 aa17.01■□□□□ 0.31
CLIC4-203ENST00000489758 PLA2G4AP47712 749 aa17.01■□□□□ 0.31
CLIC4-203ENST00000489758 ALDH1A3P47895 512 aa17.01■□□□□ 0.31
CLIC4-203ENST00000489758 RPL34P49207 117 aaKnown RBP17.01■□□□□ 0.31
CLIC4-203ENST00000489758 PLD1Q13393 1074 aa17.01■□□□□ 0.31
CLIC4-203ENST00000489758 CCDC85BQ15834 202 aaPredicted RBP17.01■□□□□ 0.31
CLIC4-203ENST00000489758 ELMSAN1Q6PJG2 1045 aa17.01■□□□□ 0.31
CLIC4-203ENST00000489758 GPRIN1Q7Z2K8 1008 aa17.01■□□□□ 0.31
CLIC4-203ENST00000489758 PIGZQ86VD9 579 aa17.01■□□□□ 0.31
CLIC4-203ENST00000489758 PASD1Q8IV76 773 aa17.01■□□□□ 0.31
CLIC4-203ENST00000489758 GIPC2Q8TF65 315 aa17.01■□□□□ 0.31
CLIC4-203ENST00000489758 CEP295NLQ96MC4 621 aa17.01■□□□□ 0.31
CLIC4-203ENST00000489758 PRKD2Q9BZL6 878 aa17.01■□□□□ 0.31
CLIC4-203ENST00000489758 CLDND1Q9NY35 253 aa17.01■□□□□ 0.31
CLIC4-203ENST00000489758 BZW2Q9Y6E2 419 aaKnown RBP17.01■□□□□ 0.31
CLIC4-203ENST00000489758 CCDC195A0A1B0GUA6 201 aa17■□□□□ 0.31
CLIC4-203ENST00000489758 SLC38A8A6NNN8 435 aa17■□□□□ 0.31
CLIC4-203ENST00000489758 CCL16O15467 120 aa17■□□□□ 0.31
CLIC4-203ENST00000489758 LSM8O95777 96 aaKnown RBP17■□□□□ 0.31
CLIC4-203ENST00000489758 LRG1P02750 347 aa17■□□□□ 0.31
CLIC4-203ENST00000489758 CYP1A1P04798 512 aaPredicted RBP17■□□□□ 0.31
CLIC4-203ENST00000489758 HMGA1P17096 107 aaKnown RBP17■□□□□ 0.31
CLIC4-203ENST00000489758 FECHP22830 423 aa17■□□□□ 0.31
CLIC4-203ENST00000489758 ANXA13P27216 316 aa17■□□□□ 0.31
CLIC4-203ENST00000489758 EPHB3P54753 998 aa17■□□□□ 0.31
CLIC4-203ENST00000489758 MTMR3Q13615 1198 aa17■□□□□ 0.31
CLIC4-203ENST00000489758 RAB41Q5JT25 222 aa17■□□□□ 0.31
CLIC4-203ENST00000489758 PMF1Q6P1K2 205 aa17■□□□□ 0.31
CLIC4-203ENST00000489758 SLC30A5Q8TAD4 765 aa17■□□□□ 0.31
CLIC4-203ENST00000489758 KCTD13Q8WZ19 329 aa17■□□□□ 0.31
CLIC4-203ENST00000489758 MSLNLQ96KJ4 702 aa17■□□□□ 0.31
CLIC4-203ENST00000489758 PANX2Q96RD6 677 aa17■□□□□ 0.31
CLIC4-203ENST00000489758 S1PR5Q9H228 398 aa17■□□□□ 0.31
CLIC4-203ENST00000489758 IL37Q9NZH6 218 aa17■□□□□ 0.31
CLIC4-203ENST00000489758 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.99■□□□□ 0.31
CLIC4-203ENST00000489758 DDX3XO00571 662 aaKnown RBP eCLIP16.99■□□□□ 0.311e-21■■■■■ 50.4
CLIC4-203ENST00000489758 HOXB8P17481 243 aaPredicted RBP16.99■□□□□ 0.31
CLIC4-203ENST00000489758 SLC5A3P53794 718 aa16.99■□□□□ 0.31
CLIC4-203ENST00000489758 SLC8A3P57103 927 aa16.99■□□□□ 0.31
CLIC4-203ENST00000489758 USP46P62068 366 aa16.99■□□□□ 0.31
CLIC4-203ENST00000489758 NOMO3P69849 1222 aa16.99■□□□□ 0.31
CLIC4-203ENST00000489758 CDK17Q00537 523 aa16.99■□□□□ 0.31
CLIC4-203ENST00000489758 TRIM72Q6ZMU5 477 aa16.99■□□□□ 0.31
CLIC4-203ENST00000489758 DNAJB7Q7Z6W7 309 aaPredicted RBP16.99■□□□□ 0.31
CLIC4-203ENST00000489758 NUP93Q8N1F7 819 aa16.99■□□□□ 0.31
CLIC4-203ENST00000489758 C1orf131Q8NDD1 294 aaKnown RBP16.99■□□□□ 0.31
CLIC4-203ENST00000489758 SCAMP5Q8TAC9 235 aa16.99■□□□□ 0.31
CLIC4-203ENST00000489758 STK32AQ8WU08 396 aa16.99■□□□□ 0.31
CLIC4-203ENST00000489758 PSMG2Q969U7 264 aa16.99■□□□□ 0.31
CLIC4-203ENST00000489758 CHP1Q99653 195 aa16.99■□□□□ 0.31
CLIC4-203ENST00000489758 SLC4A5Q9BY07 1137 aa16.99■□□□□ 0.31
CLIC4-203ENST00000489758 LRRC3Q9BY71 257 aa16.99■□□□□ 0.31
CLIC4-203ENST00000489758 ZNHIT6Q9NWK9 470 aaKnown RBP16.99■□□□□ 0.31
CLIC4-203ENST00000489758 ASB3Q9Y575 518 aa16.99■□□□□ 0.31
CLIC4-203ENST00000489758 UNGP13051 313 aaPredicted RBP16.98■□□□□ 0.31
CLIC4-203ENST00000489758 KIF11P52732 1056 aa16.98■□□□□ 0.31
CLIC4-203ENST00000489758 PDCLQ13371 301 aa16.98■□□□□ 0.31
CLIC4-203ENST00000489758 MAPK8IP2Q13387 824 aaPredicted RBP16.98■□□□□ 0.31
CLIC4-203ENST00000489758 VEPH1Q14D04 833 aa16.98■□□□□ 0.31
CLIC4-203ENST00000489758 CLEC16AQ2KHT3 1053 aa16.98■□□□□ 0.31
CLIC4-203ENST00000489758 TDRD12Q587J7 1177 aaKnown RBP16.98■□□□□ 0.31
CLIC4-203ENST00000489758 RARS2Q5T160 578 aaKnown RBP16.98■□□□□ 0.31
CLIC4-203ENST00000489758 TMC5Q6UXY8 1006 aa16.98■□□□□ 0.31
CLIC4-203ENST00000489758 DENND5BQ6ZUT9 1274 aa16.98■□□□□ 0.31
CLIC4-203ENST00000489758 GPR149Q86SP6 731 aa16.98■□□□□ 0.31
CLIC4-203ENST00000489758 TMC8Q8IU68 726 aa16.98■□□□□ 0.31
CLIC4-203ENST00000489758 TMEM35BQ8NCS4 154 aa16.98■□□□□ 0.31
CLIC4-203ENST00000489758 PPM1EQ8WY54 764 aa16.98■□□□□ 0.31
CLIC4-203ENST00000489758 TRMT2BQ96GJ1 504 aaKnown RBP16.98■□□□□ 0.31
CLIC4-203ENST00000489758 PDLIM2Q96JY6 352 aa16.98■□□□□ 0.31
CLIC4-203ENST00000489758 MYRFLQ96LU7 910 aa16.98■□□□□ 0.31
CLIC4-203ENST00000489758 TTLL2Q9BWV7 592 aa16.98■□□□□ 0.31
CLIC4-203ENST00000489758 PDCL3Q9H2J4 239 aa16.98■□□□□ 0.31
CLIC4-203ENST00000489758 ZNF334Q9HCZ1 680 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms