RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 TJP2Q9UDY2 1190 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 STK39Q9UEW8 545 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 ANAPC7Q9UJX3 599 aa14.93□□□□□ -0.02
VPS26A-205ENST00000489656 TMEM191CA6NGB0 347 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 AP1G2O75843 785 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 SOD2P04179 222 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 ATP1A1P05023 1023 aaKnown RBP14.92□□□□□ -0.02
VPS26A-205ENST00000489656 LINC00271P0C7V0 271 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 PRLRP16471 622 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 MAN1A1P33908 653 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 SMARCB1Q12824 385 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 CFAP221Q4G0U5 840 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 CTXN3Q4LDR2 81 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 RTP2Q5QGT7 225 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 SPOUT1Q5T280 376 aaKnown RBP14.92□□□□□ -0.02
VPS26A-205ENST00000489656 LLGL2Q6P1M3 1020 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 DAAM2Q86T65 1068 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 NT5DC3Q86UY8 548 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 FIBCD1Q8N539 461 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 FNIP1Q8TF40 1166 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 PIK3R5Q8WYR1 880 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 DPF3Q92784 378 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 TMEM169Q96HH4 297 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 TMEM209Q96SK2 561 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 RAD9AQ99638 391 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 SMOQ99835 787 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 TLR10Q9BXR5 811 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 L2HGDHQ9H9P8 463 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 PNPLA8Q9NP80 782 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 ST7Q9NRC1 585 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 TMLHEQ9NVH6 421 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 MTRRQ9UBK8 725 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 CHORDC1Q9UHD1 332 aaPredicted RBP14.92□□□□□ -0.02
VPS26A-205ENST00000489656 AMFRQ9UKV5 643 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 BACE2Q9Y5Z0 518 aa14.92□□□□□ -0.02
VPS26A-205ENST00000489656 MYO1FO00160 1098 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 ATP2A2P16615 1042 aaKnown RBP14.91□□□□□ -0.02
VPS26A-205ENST00000489656 RGS7P49802 495 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 FAM183BPQ6ZVS7 135 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 ARCQ7LC44 396 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 TAS1R1Q7RTX1 841 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 PEX26Q7Z412 305 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 DDX53Q86TM3 631 aaKnown RBP14.91□□□□□ -0.02
VPS26A-205ENST00000489656 PIGZQ86VD9 579 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 CEP57Q86XR8 500 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 ZMIZ2Q8NF64 920 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 C2orf15Q8WU43 125 aaKnown RBP14.91□□□□□ -0.02
VPS26A-205ENST00000489656 HES6Q96HZ4 224 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 ZBED2Q9BTP6 218 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 SELENOOQ9BVL4 669 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 DMAP1Q9NPF5 467 aaPredicted RBP14.91□□□□□ -0.02
VPS26A-205ENST00000489656 IP6K2Q9UHH9 426 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 SNX12Q9UMY4 172 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 PCDHB12Q9Y5F1 795 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 NR2E3Q9Y5X4 410 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 ALG6Q9Y672 507 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 DENND4CQ5VZ89 1909 aa14.91□□□□□ -0.02
VPS26A-205ENST00000489656 ATG2AQ2TAZ0 1938 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 MIF4GDA9UHW6 222 aaKnown RBP14.9□□□□□ -0.02
VPS26A-205ENST00000489656 HHLA1C9JL84 531 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 ENC1O14682 589 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 PAPSS1O43252 624 aaPredicted RBP14.9□□□□□ -0.02
VPS26A-205ENST00000489656 BEST1O76090 585 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 PROSCO94903 275 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 FTCDO95954 541 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 KRT3P12035 628 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 SLC1A1P43005 524 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 MAGEA11P43364 429 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 CACNA2D1P54289 1103 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 MAP3K7CLP57077 242 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 RPL7AP62424 266 aaKnown RBP14.9□□□□□ -0.02
VPS26A-205ENST00000489656 SLC6A3Q01959 620 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 DSG1Q02413 1049 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 GPR17Q13304 367 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 MESDQ14696 234 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 SLC39A12Q504Y0 691 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 RAB41Q5JT25 222 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 OR6B2Q6IFH4 312 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 SLC8B1Q6J4K2 584 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 DCUN1D2Q6PH85 259 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 OLFML1Q6UWY5 402 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 VSTM1Q6UX27 236 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 PHLDB2Q86SQ0 1253 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 SPATA2LQ8IUW3 424 aaPredicted RBP14.9□□□□□ -0.02
VPS26A-205ENST00000489656 SCML4Q8N228 414 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 NIPA2Q8N8Q9 360 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 CD101Q93033 1021 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 B3GALT6Q96L58 329 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 MCEEQ96PE7 176 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 GOLPH3Q9H4A6 298 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 TMEM30AQ9NV96 361 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 TMEM59LQ9UK28 342 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 HYOU1Q9Y4L1 999 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 SAR1BQ9Y6B6 198 aa14.9□□□□□ -0.02
VPS26A-205ENST00000489656 CCDC85CA6NKD9 419 aa14.89□□□□□ -0.03
VPS26A-205ENST00000489656 GOLGA8SH3BPF8 625 aa14.89□□□□□ -0.03
VPS26A-205ENST00000489656 CES2O00748 559 aa14.89□□□□□ -0.03
VPS26A-205ENST00000489656 URI1O94763 535 aaPredicted RBP14.89□□□□□ -0.03
VPS26A-205ENST00000489656 FBXO21O94952 628 aa14.89□□□□□ -0.03
VPS26A-205ENST00000489656 TCP1P17987 556 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms