RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 SMOQ99835 787 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 CYP4F11Q9HBI6 524 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 LUC7LQ9NQ29 371 aaKnown RBP14.67□□□□□ -0.06
C9orf3-221ENST00000489562 NAGPAQ9UK23 515 aa14.67□□□□□ -0.06
C9orf3-221ENST00000489562 PRRC2BQ5JSZ5 2229 aaKnown RBP14.67□□□□□ -0.06
C9orf3-221ENST00000489562 A0A087X0T9 212 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 EIF3CLB5ME19 914 aaKnown RBP14.66□□□□□ -0.06
C9orf3-221ENST00000489562 F8VP50 259 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 CFHP08603 1231 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 FAM228BP0C875 321 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 SRGAP2BP0DMP2 458 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 HOXA9P31269 272 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 ALDH1A3P47895 512 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 NRIP1P48552 1158 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 MAP3K7CLP57077 242 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 PDCLQ13371 301 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 GRIN2CQ14957 1233 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 VEPH1Q14D04 833 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 C10orf76Q5T2E6 689 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 NAA35Q5VZE5 725 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 ACAD10Q6JQN1 1059 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 ALKBH5Q6P6C2 394 aaKnown RBP14.66□□□□□ -0.06
C9orf3-221ENST00000489562 ADGRD2Q7Z7M1 963 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 PHF13Q86YI8 300 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-221ENST00000489562 SCN4BQ8IWT1 228 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 C1orf131Q8NDD1 294 aaKnown RBP14.66□□□□□ -0.06
C9orf3-221ENST00000489562 ZMIZ2Q8NF64 920 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 IPO4Q8TEX9 1081 aaKnown RBP14.66□□□□□ -0.06
C9orf3-221ENST00000489562 KCTD13Q8WZ19 329 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 TRIM11Q96F44 468 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 LRCH3Q96II8 777 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 GAS2L1Q99501 681 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-221ENST00000489562 EIF3CQ99613 913 aaKnown RBP14.66□□□□□ -0.06
C9orf3-221ENST00000489562 RHOBTB2Q9BYZ6 727 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 EHD2Q9NZN4 543 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 YIPF1Q9Y548 306 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 INSL5Q9Y5Q6 135 aa14.66□□□□□ -0.06
C9orf3-221ENST00000489562 SOWAHDA6NJG2 315 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 NCK2O43639 380 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 RTN2O75298 545 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 NDUFA10O95299 355 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 LCA5LO95447 670 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 SEC24AO95486 1093 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 SSTR3P32745 418 aaPredicted RBP14.65□□□□□ -0.06
C9orf3-221ENST00000489562 RPL34P49207 117 aaKnown RBP14.65□□□□□ -0.06
C9orf3-221ENST00000489562 CACNA2D1P54289 1103 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 EPHB3P54753 998 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 CCZ1BP86790 482 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 CCZ1P86791 482 aaPredicted RBP14.65□□□□□ -0.06
C9orf3-221ENST00000489562 SPA17Q15506 151 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 HABP4Q5JVS0 413 aaKnown RBP14.65□□□□□ -0.06
C9orf3-221ENST00000489562 PIGZQ86VD9 579 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 ERICH1Q86X53 443 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 WDTC1Q8N5D0 677 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 TTC9BQ8N6N2 239 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 CASP10Q92851 521 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 VCPIP1Q96JH7 1222 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 KCNK16Q96T55 309 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 SLC4A5Q9BY07 1137 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 ISCUQ9H1K1 167 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 CRISPLD1Q9H336 500 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 SYNCQ9H7C4 482 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 LRRC4Q9HBW1 653 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 MAN1C1Q9NR34 630 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 TMEM30AQ9NV96 361 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 DZANK1Q9NVP4 752 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 COMMD8Q9NX08 183 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 STRIP2Q9ULQ0 834 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 NENFQ9UMX5 172 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 SLC27A5Q9Y2P5 690 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 ASB3Q9Y575 518 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 HCFC2Q9Y5Z7 792 aa14.65□□□□□ -0.06
C9orf3-221ENST00000489562 EPN1Q9Y6I3 576 aaPredicted RBP14.65□□□□□ -0.06
C9orf3-221ENST00000489562 LAMA3Q16787 3333 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 DENND4CQ5VZ89 1909 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 HHLA1C9JL84 531 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 PER2O15055 1255 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 ZMYND10O75800 440 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 BEST1O76090 585 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 FBXO21O94952 628 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 RTN3O95197 1032 aaPredicted RBP14.64□□□□□ -0.07
C9orf3-221ENST00000489562 LRG1P02750 347 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 CALB1P05937 261 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 C8AP07357 584 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 POU2F2P09086 479 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 HNRNPA1P09651 372 aaKnown RBP eCLIP14.64□□□□□ -0.07
C9orf3-221ENST00000489562 CSH1P0DML2 217 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 CSH2P0DML3 217 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 MMP8P22894 467 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 KRT83P78385 493 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 GFPT1Q06210 699 aaPredicted RBP14.64□□□□□ -0.07
C9orf3-221ENST00000489562 C1QBPQ07021 282 aaKnown RBP14.64□□□□□ -0.07
C9orf3-221ENST00000489562 TCEAL5Q5H9L2 206 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 RAB41Q5JT25 222 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 CCDC122Q5T0U0 273 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 PMF1Q6P1K2 205 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 RAD9BQ6WBX8 426 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 TMEM110Q86TL2 294 aa14.64□□□□□ -0.07
C9orf3-221ENST00000489562 RBM23Q86U06 439 aaKnown RBP14.64□□□□□ -0.07
C9orf3-221ENST00000489562 ITIH5Q86UX2 942 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms