RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 BCLAF3A2AJT9 711 aaKnown RBP12.73□□□□□ -0.37
SFXN3-207ENST00000489434 DCLK1O15075 740 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 HCRTO43612 131 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 ALDH1A2O94788 518 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 ABL1P00519 1130 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 SYT1P21579 422 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 WARSP23381 471 aaKnown RBP12.73□□□□□ -0.37
SFXN3-207ENST00000489434 LMO2P25791 158 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 GNL1P36915 607 aaPredicted RBP12.73□□□□□ -0.37
SFXN3-207ENST00000489434 SHC2P98077 582 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 CUL4AQ13619 759 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 SLC39A14Q15043 492 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 CCDC142Q17RM4 750 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 C2orf27AQ580R0 203 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 DAB2IPQ5VWQ8 1189 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 LMBRD2Q68DH5 695 aaPredicted RBP12.73□□□□□ -0.37
SFXN3-207ENST00000489434 HS2ST1Q7LGA3 356 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 LIMS2Q7Z4I7 341 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 CBWD2Q8IUF1 395 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 PDILTQ8N807 584 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 OR5B17Q8NGF7 314 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 MYCBPAPQ8TBZ2 947 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 USP33Q8TEY7 942 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 KBTBD7Q8WVZ9 684 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 FAM84AQ96KN4 292 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 SLITRK1Q96PX8 696 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 FNBP1Q96RU3 617 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 EDEM2Q9BV94 578 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 LINC00597Q9H2U6 94 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 SMOC1Q9H4F8 434 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 HSPBP1Q9NZL4 362 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 MORC2Q9Y6X9 1032 aaPredicted RBP12.73□□□□□ -0.37
SFXN3-207ENST00000489434 CFAP47Q6ZTR5 3102 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 MYO16Q9Y6X6 1858 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 GON4LQ3T8J9 2241 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 LEFTY2O00292 366 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 KHNYNO15037 678 aaKnown RBP12.72□□□□□ -0.37
SFXN3-207ENST00000489434 KCNK5O95279 499 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 ADH1CP00326 375 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 DLATP10515 647 aaKnown RBP12.72□□□□□ -0.37
SFXN3-207ENST00000489434 TNNI1P19237 187 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 PMLP29590 882 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 SEC13P55735 322 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 TNNC1P63316 161 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 NOP14P78316 857 aaKnown RBP12.72□□□□□ -0.37
SFXN3-207ENST00000489434 SLC7A9P82251 487 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 MRPS21P82921 87 aaKnown RBP12.72□□□□□ -0.37
SFXN3-207ENST00000489434 RESTQ13127 1097 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 STK38Q15208 465 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 SNRNP35Q16560 246 aaKnown RBP12.72□□□□□ -0.37
SFXN3-207ENST00000489434 MDH1BQ5I0G3 518 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 TDRD10Q5VZ19 366 aaKnown RBP12.72□□□□□ -0.37
SFXN3-207ENST00000489434 TCEAL6Q6IPX3 200 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 ANO7Q6IWH7 933 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 CYP2U1Q7Z449 544 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 TTC30AQ86WT1 665 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 DDX42Q86XP3 938 aaKnown RBP eCLIP12.72□□□□□ -0.37
SFXN3-207ENST00000489434 EZH1Q92800 747 aaPredicted RBP12.72□□□□□ -0.37
SFXN3-207ENST00000489434 TCEAL3Q969E4 200 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 PCED1BQ96HM7 432 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 TTLL2Q9BWV7 592 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 ELOVL4Q9GZR5 314 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 TNMDQ9H2S6 317 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 CUEDC2Q9H467 287 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 ZSCAN16Q9H4T2 348 aaPredicted RBP12.72□□□□□ -0.37
SFXN3-207ENST00000489434 CRTAC1Q9NQ79 661 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 MMP17Q9ULZ9 603 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 CACNA1GO43497 2377 aa12.72□□□□□ -0.37
SFXN3-207ENST00000489434 FRYQ5TBA9 3013 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 ATP8B3O60423 1300 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 ZNF840PA6NDX5 716 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 F8VP50 259 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 EIF3DO15371 548 aaKnown RBP eCLIP12.71□□□□□ -0.37
SFXN3-207ENST00000489434 MAP3K13O43283 966 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 CENPBP07199 599 aaPredicted RBP12.71□□□□□ -0.37
SFXN3-207ENST00000489434 FAM163BP0C2L3 166 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 OPRD1P41143 372 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 NOVA1P51513 510 aaKnown RBP12.71□□□□□ -0.37
SFXN3-207ENST00000489434 SNRPFP62306 86 aaKnown RBP12.71□□□□□ -0.37
SFXN3-207ENST00000489434 ASIC1P78348 528 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 TRPC3Q13507 836 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 HSF5Q4G112 596 aaPredicted RBP12.71□□□□□ -0.37
SFXN3-207ENST00000489434 PMS2CLQ68D20 193 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 SCARA3Q6AZY7 606 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 PSAPL1Q6NUJ1 521 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 FAM173BQ6P4H8 233 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 TRAPPC11Q7Z392 1133 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 FILIP1Q7Z7B0 1213 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 CCDC33Q8N5R6 958 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 OR6B3Q8NGW1 331 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 SPACA7Q96KW9 195 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 CNOT6LQ96LI5 555 aaKnown RBP12.71□□□□□ -0.37
SFXN3-207ENST00000489434 C8orf48Q96LL4 319 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 PNKPQ96T60 521 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 FGFBP2Q9BYJ0 223 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 SMPD4Q9NXE4 827 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 TBC1D14Q9P2M4 693 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 CIZ1Q9ULV3 898 aaPredicted RBP12.71□□□□□ -0.37
SFXN3-207ENST00000489434 INVSQ9Y283 1065 aa12.71□□□□□ -0.37
SFXN3-207ENST00000489434 KIAA1549LQ6ZVL6 1849 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms