RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 AAASQ9NRG9 546 aa9.49□□□□□ -0.89
EXOSC1-211ENST00000489158 CORO1CQ9ULV4 474 aaPredicted RBP9.49□□□□□ -0.89
EXOSC1-211ENST00000489158 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.49□□□□□ -0.89
EXOSC1-211ENST00000489158 CITO14578 2027 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 PTPRJQ12913 1337 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 MROH7Q68CQ1 1323 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 LIN7AO14910 233 aaPredicted RBP9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 GPR182O15218 404 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 NPTXRO95502 500 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 C4BPAP04003 597 aaKnown RBP9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 CCNB1P14635 433 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 BRAFP15056 766 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 HOXA11P31270 313 aaPredicted RBP9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 CHKAP35790 457 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 THPOP40225 353 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 HADHBP55084 474 aaKnown RBP9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 TFAMQ00059 246 aaKnown RBP9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 CALCOCO2Q13137 446 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 LLGL1Q15334 1064 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 CYP1B1Q16678 543 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 TDRD10Q5VZ19 366 aaKnown RBP9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 PHLDB3Q6NSJ2 640 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 SLC13A5Q86YT5 568 aaPredicted RBP9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 NT5C1BQ96P26 610 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 ACAP3Q96P50 834 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 RNF208Q9H0X6 261 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 PLEKHA5Q9HAU0 1116 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 DNAJC17Q9NVM6 304 aaKnown RBP9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 MTUS1Q9ULD2 1270 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 DERAQ9Y315 318 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 DNAH12Q6ZR08 3092 aa9.48□□□□□ -0.89
EXOSC1-211ENST00000489158 ENO4A6NNW6 628 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 ATMINO43313 823 aaPredicted RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 ATP5DP30049 168 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 STX2P32856 288 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 CTCFP49711 727 aaPredicted RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 CCNG1P51959 295 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 GPC5P78333 572 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 ADCY1Q08828 1119 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 NFX1Q12986 1120 aaKnown RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 MTFR1Q15390 333 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 SIX1Q15475 284 aaPredicted RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 DUOXA2Q1HG44 320 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 TRIM71Q2Q1W2 868 aaKnown RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 WDR44Q5JSH3 913 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 RNF43Q68DV7 783 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 ECHDC2Q86YB7 292 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 ARHGEF19Q8IW93 802 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 RPUSD2Q8IZ73 545 aaKnown RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 CYP4X1Q8N118 509 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 ANKLE1Q8NAG6 615 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 OR5B17Q8NGF7 314 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 SEMA4DQ92854 862 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 WNT8BQ93098 351 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 UTP4Q969X6 686 aaKnown RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 ELMO3Q96BJ8 720 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 ARMC5Q96C12 935 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 ANKRD36BP1Q96IX9 119 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 BTBD6Q96KE9 485 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 DEFB118Q96PH6 123 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 RPS6KC1Q96S38 1066 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 PI4K2AQ9BTU6 479 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 IMPG2Q9BZV3 1241 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 MTMR12Q9C0I1 747 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 YIPF3Q9GZM5 350 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 ETNK1Q9HBU6 452 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 C1orf112Q9NSG2 853 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 TRMT13Q9NUP7 481 aaKnown RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 KLHL14Q9P2G3 628 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 NKX1-2Q9UD57 310 aaPredicted RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 C2CD2Q9Y426 696 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 PDCD11Q14690 1871 aaKnown RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 A6NHS1 94 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 WFS1O76024 890 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 ECEL1O95672 775 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 HLA-DRAP01903 254 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 TNNC2P02585 160 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 LINGO3P0C6S8 592 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 YARSP54577 528 aaKnown RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 GCNT1Q02742 428 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 SNX1Q13596 522 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 KYNUQ16719 465 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 TRIM68Q6AZZ1 485 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 TWF2Q6IBS0 349 aaKnown RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 HACE1Q8IYU2 909 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 C1orf54Q8WWF1 131 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 NAF1Q96HR8 494 aaKnown RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 MAGEB18Q96M61 343 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 RAB3IPQ96QF0 476 aaPredicted RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 APOL6Q9BWW8 343 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 EIF2AQ9BY44 585 aaKnown RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 CRISPLD2Q9H0B8 497 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 WNT8AQ9H1J5 351 aa9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 SPATS2LQ9NUQ6 558 aaKnown RBP9.47□□□□□ -0.89
EXOSC1-211ENST00000489158 TP73O15350 636 aa9.46□□□□□ -0.89
EXOSC1-211ENST00000489158 UPP2O95045 317 aa9.46□□□□□ -0.89
EXOSC1-211ENST00000489158 UNC5CO95185 931 aa9.46□□□□□ -0.89
EXOSC1-211ENST00000489158 LUC7L3O95232 432 aaKnown RBP9.46□□□□□ -0.89
EXOSC1-211ENST00000489158 CHRNA1P02708 482 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms