RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 SLC6A3Q01959 620 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 ADIGQ0VDE8 80 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 PIGHQ14442 188 aaPredicted RBP10.54□□□□□ -0.72
USP11-211ENST00000489111 USP41Q3LFD5 358 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 PPP1R15BQ5SWA1 713 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 FAM171BQ6P995 826 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 OLFML1Q6UWY5 402 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 PAQR9Q6ZVX9 377 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 C16orf59Q7L2K0 433 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 TMEM173Q86WV6 379 aaPredicted RBP10.54□□□□□ -0.72
USP11-211ENST00000489111 COLGALT1Q8NBJ5 622 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 KCTD13Q8WZ19 329 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 HES6Q96HZ4 224 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 IGSF21Q96ID5 467 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 PBKQ96KB5 322 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 B3GALT6Q96L58 329 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 TMEM209Q96SK2 561 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 PKMYT1Q99640 499 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 CARD6Q9BX69 1037 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 ZCWPW1Q9H0M4 648 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 RC3H2Q9HBD1 1191 aaKnown RBP10.54□□□□□ -0.72
USP11-211ENST00000489111 ABI2Q9NYB9 513 aaPredicted RBP10.54□□□□□ -0.72
USP11-211ENST00000489111 SPG21Q9NZD8 308 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 PCDH10Q9P2E7 1040 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 USTQ9Y2C2 406 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.54□□□□□ -0.72
USP11-211ENST00000489111 SLC4A7Q9Y6M7 1214 aa10.54□□□□□ -0.72
USP11-211ENST00000489111 CTAGE15A4D2H0 777 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 CES2O00748 559 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 PAPSS1O43252 624 aaPredicted RBP10.53□□□□□ -0.72
USP11-211ENST00000489111 SART1O43290 800 aaKnown RBP10.53□□□□□ -0.72
USP11-211ENST00000489111 CEP104O60308 925 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 FBXO21O94952 628 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 GJB5O95377 273 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 OR4Q2P0C623 313 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 CTAGE8P0CG41 777 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 CTNNA2P26232 953 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 CTNNA1P35221 906 aaKnown RBP10.53□□□□□ -0.72
USP11-211ENST00000489111 RFC1P35251 1148 aaPredicted RBP10.53□□□□□ -0.72
USP11-211ENST00000489111 GJC1P36383 396 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 EPHB4P54760 987 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 ARPP19P56211 112 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 RNASE9P60153 205 aaKnown RBP10.53□□□□□ -0.72
USP11-211ENST00000489111 CFAP221Q4G0U5 840 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 RTP2Q5QGT7 225 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 TMEM240Q5SV17 173 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 CTAGE6Q86UF2 777 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 SCUBE3Q8IX30 993 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 CTAGE4Q8IX94 777 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 RHOT1Q8IXI2 618 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 SLC39A11Q8N1S5 342 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 FIBCD1Q8N539 461 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 EMC1Q8N766 993 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 NIPA2Q8N8Q9 360 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 MYRIPQ8NFW9 859 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 JOSD2Q8TAC2 188 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 FNIP1Q8TF40 1166 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 COG1Q8WTW3 980 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 RIN2Q8WYP3 895 aaPredicted RBP10.53□□□□□ -0.72
USP11-211ENST00000489111 HERVK_113Q902F9 699 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 DPF3Q92784 378 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 FUBP3Q96I24 572 aaKnown RBP eCLIP10.53□□□□□ -0.72
USP11-211ENST00000489111 SLC9A7Q96T83 725 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 SMOQ99835 787 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.53□□□□□ -0.72
USP11-211ENST00000489111 PLVAPQ9BX97 442 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 RHOBTB2Q9BYZ6 727 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 TMLHEQ9NVH6 421 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 RNF14Q9UBS8 474 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 STK39Q9UEW8 545 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 PCDHB5Q9Y5E4 795 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 PCDHB12Q9Y5F1 795 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 SCN1AP35498 2009 aa10.53□□□□□ -0.72
USP11-211ENST00000489111 PGRMC1O00264 195 aaKnown RBP10.52□□□□□ -0.73
USP11-211ENST00000489111 ZNF185O15231 689 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 PSTPIP1O43586 416 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 HSF2BPO75031 334 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 GRAP2O75791 330 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 URODP06132 367 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 PDGFRAP16234 1089 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 ATP2A2P16615 1042 aaKnown RBP10.52□□□□□ -0.73
USP11-211ENST00000489111 GPD1P21695 349 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 SDC4P31431 198 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 GRIK1P39086 918 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 RPL34P49207 117 aaKnown RBP10.52□□□□□ -0.73
USP11-211ENST00000489111 GLUD2P49448 558 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 TKTL1P51854 596 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 RWDD2BP57060 319 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 SMARCB1Q12824 385 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 MRPL58Q14197 206 aaKnown RBP10.52□□□□□ -0.73
USP11-211ENST00000489111 CLUL1Q15846 466 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 PSMD5Q16401 504 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 ODF2Q5BJF6 829 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 EFHC1Q5JVL4 640 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 ZFYVE27Q5T4F4 411 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 SEL1L2Q5TEA6 688 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 PRSS55Q6UWB4 352 aaPredicted RBP10.52□□□□□ -0.73
USP11-211ENST00000489111 SLC26A9Q7LBE3 791 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 LRRTM3Q86VH5 581 aa10.52□□□□□ -0.73
USP11-211ENST00000489111 HERC6Q8IVU3 1022 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms