RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ATRIPQ8WXE1 791 aa24.51■■□□□ 1.51
COL9A3-213ENST00000489045 NELL1Q92832 810 aa24.51■■□□□ 1.51
COL9A3-213ENST00000489045 C8orf48Q96LL4 319 aa24.51■■□□□ 1.51
COL9A3-213ENST00000489045 B3GNT5Q9BYG0 378 aa24.51■■□□□ 1.51
COL9A3-213ENST00000489045 ZNF518BQ9C0D4 1074 aa24.51■■□□□ 1.51
COL9A3-213ENST00000489045 ELOVL4Q9GZR5 314 aa24.51■■□□□ 1.51
COL9A3-213ENST00000489045 TMEM30AQ9NV96 361 aa24.51■■□□□ 1.51
COL9A3-213ENST00000489045 FRYLO94915 3013 aa24.5■■□□□ 1.51
COL9A3-213ENST00000489045 CLDN5O00501 218 aa24.5■■□□□ 1.51
COL9A3-213ENST00000489045 TDGF1P13385 188 aa24.5■■□□□ 1.51
COL9A3-213ENST00000489045 NR2F2P24468 414 aa24.5■■□□□ 1.51
COL9A3-213ENST00000489045 CCR3P51677 355 aa24.5■■□□□ 1.51
COL9A3-213ENST00000489045 KCNB1Q14721 858 aa24.5■■□□□ 1.51
COL9A3-213ENST00000489045 MTF1Q14872 753 aa24.5■■□□□ 1.51
COL9A3-213ENST00000489045 ZNF77Q15935 545 aa24.5■■□□□ 1.51
COL9A3-213ENST00000489045 ZACNQ401N2 412 aa24.5■■□□□ 1.51
COL9A3-213ENST00000489045 Q6ZS52 159 aa24.5■■□□□ 1.51
COL9A3-213ENST00000489045 TTC16Q8NEE8 873 aa24.5■■□□□ 1.51
COL9A3-213ENST00000489045 TTLL2Q9BWV7 592 aa24.5■■□□□ 1.51
COL9A3-213ENST00000489045 SDCBP2Q9H190 292 aa24.5■■□□□ 1.51
COL9A3-213ENST00000489045 GCNT4Q9P109 453 aa24.5■■□□□ 1.51
COL9A3-213ENST00000489045 OTOL1A6NHN0 477 aaPredicted RBP24.49■■□□□ 1.51
COL9A3-213ENST00000489045 ARSAP15289 507 aa24.49■■□□□ 1.51
COL9A3-213ENST00000489045 NOP14P78316 857 aaKnown RBP24.49■■□□□ 1.51
COL9A3-213ENST00000489045 USP4Q13107 963 aa24.49■■□□□ 1.51
COL9A3-213ENST00000489045 PPP2R5DQ14738 602 aa24.49■■□□□ 1.51
COL9A3-213ENST00000489045 NFIL3Q16649 462 aa24.49■■□□□ 1.51
COL9A3-213ENST00000489045 DGKKQ5KSL6 1271 aa24.49■■□□□ 1.51
COL9A3-213ENST00000489045 C1orf220Q5T0J3 134 aa24.49■■□□□ 1.51
COL9A3-213ENST00000489045 SV2AQ7L0J3 742 aa24.49■■□□□ 1.51
COL9A3-213ENST00000489045 GUF1Q8N442 669 aaKnown RBP24.49■■□□□ 1.51
COL9A3-213ENST00000489045 EHD2Q9NZN4 543 aa24.49■■□□□ 1.51
COL9A3-213ENST00000489045 TRPM5Q9NZQ8 1165 aa24.49■■□□□ 1.51
COL9A3-213ENST00000489045 MAPK13O15264 365 aa24.48■■□□□ 1.51
COL9A3-213ENST00000489045 VAMP7P51809 220 aa24.48■■□□□ 1.51
COL9A3-213ENST00000489045 SATB1Q01826 763 aa24.48■■□□□ 1.51
COL9A3-213ENST00000489045 CCINQ13939 588 aa24.48■■□□□ 1.51
COL9A3-213ENST00000489045 PDGFRLQ15198 375 aa24.48■■□□□ 1.51
COL9A3-213ENST00000489045 SGSM1Q2NKQ1 1148 aa24.48■■□□□ 1.51
COL9A3-213ENST00000489045 SPEM1Q8N4L4 309 aa24.48■■□□□ 1.51
COL9A3-213ENST00000489045 SUMF1Q8NBK3 374 aa24.48■■□□□ 1.51
COL9A3-213ENST00000489045 FAM126AQ9BYI3 521 aaPredicted RBP24.48■■□□□ 1.51
COL9A3-213ENST00000489045 IKBKBO14920 756 aa24.47■■□□□ 1.51
COL9A3-213ENST00000489045 LILRB5O75023 590 aa24.47■■□□□ 1.51
COL9A3-213ENST00000489045 AKAP3O75969 853 aa24.47■■□□□ 1.51
COL9A3-213ENST00000489045 P4HA1P13674 534 aa24.47■■□□□ 1.51
COL9A3-213ENST00000489045 HDCP19113 662 aa24.47■■□□□ 1.51
COL9A3-213ENST00000489045 PIK3CAP42336 1068 aa24.47■■□□□ 1.51
COL9A3-213ENST00000489045 CXCL12P48061 93 aa24.47■■□□□ 1.51
COL9A3-213ENST00000489045 SH3RF2Q8TEC5 729 aa24.47■■□□□ 1.51
COL9A3-213ENST00000489045 TAF4BQ92750 862 aa24.47■■□□□ 1.51
COL9A3-213ENST00000489045 CHFRQ96EP1 664 aa24.47■■□□□ 1.51
COL9A3-213ENST00000489045 CCDC34Q96HJ3 373 aa24.47■■□□□ 1.51
COL9A3-213ENST00000489045 TNIP3Q96KP6 325 aa24.47■■□□□ 1.51
COL9A3-213ENST00000489045 HINFPQ9BQA5 517 aa24.47■■□□□ 1.51
COL9A3-213ENST00000489045 GPR179Q6PRD1 2367 aa24.47■■□□□ 1.51
COL9A3-213ENST00000489045 ATG2BQ96BY7 2078 aa24.46■■□□□ 1.51
COL9A3-213ENST00000489045 ATP8B3O60423 1300 aa24.46■■□□□ 1.51
COL9A3-213ENST00000489045 ASS1P00966 412 aaKnown RBP24.46■■□□□ 1.51
COL9A3-213ENST00000489045 HLA-DRAP01903 254 aa24.46■■□□□ 1.51
COL9A3-213ENST00000489045 TRIM49P0CI25 452 aa24.46■■□□□ 1.51
COL9A3-213ENST00000489045 TRIM49CP0CI26 452 aa24.46■■□□□ 1.51
COL9A3-213ENST00000489045 PDE6CP51160 858 aa24.46■■□□□ 1.51
COL9A3-213ENST00000489045 NRLP54845 237 aa24.46■■□□□ 1.51
COL9A3-213ENST00000489045 IFRD2Q12894 506 aaPredicted RBP24.46■■□□□ 1.51
COL9A3-213ENST00000489045 PNOCQ13519 176 aa24.46■■□□□ 1.51
COL9A3-213ENST00000489045 SPOPLQ6IQ16 392 aa24.46■■□□□ 1.51
COL9A3-213ENST00000489045 INTS8Q75QN2 995 aaKnown RBP24.46■■□□□ 1.51
COL9A3-213ENST00000489045 FAM35AQ86V20 835 aa24.46■■□□□ 1.51
COL9A3-213ENST00000489045 FAM186BQ8IYM0 893 aa24.46■■□□□ 1.51
COL9A3-213ENST00000489045 SMYD4Q8IYR2 804 aaPredicted RBP24.46■■□□□ 1.51
COL9A3-213ENST00000489045 FMR1NBQ8N0W7 255 aaPredicted RBP24.46■■□□□ 1.51
COL9A3-213ENST00000489045 OSCP1Q8WVF1 389 aa24.46■■□□□ 1.51
COL9A3-213ENST00000489045 MED10Q9BTT4 135 aa24.46■■□□□ 1.51
COL9A3-213ENST00000489045 DUS2Q9NX74 493 aaKnown RBP24.46■■□□□ 1.51
COL9A3-213ENST00000489045 ARHGAP26Q9UNA1 814 aa24.46■■□□□ 1.51
COL9A3-213ENST00000489045 WNT6Q9Y6F9 365 aa24.46■■□□□ 1.51
COL9A3-213ENST00000489045 MYO16Q9Y6X6 1858 aa24.46■■□□□ 1.51
COL9A3-213ENST00000489045 ZNF840PA6NDX5 716 aa24.45■■□□□ 1.5
COL9A3-213ENST00000489045 TCF3P15923 654 aa24.45■■□□□ 1.5
COL9A3-213ENST00000489045 RPL13P26373 211 aaKnown RBP24.45■■□□□ 1.5
COL9A3-213ENST00000489045 IFNAR2P48551 515 aa24.45■■□□□ 1.5
COL9A3-213ENST00000489045 ORC1Q13415 861 aa24.45■■□□□ 1.5
COL9A3-213ENST00000489045 ZCWPW2Q504Y3 356 aa24.45■■□□□ 1.5
COL9A3-213ENST00000489045 ACOT1Q86TX2 421 aa24.45■■□□□ 1.5
COL9A3-213ENST00000489045 CPA6Q8N4T0 437 aa24.45■■□□□ 1.5
COL9A3-213ENST00000489045 RUBCNQ92622 972 aa24.45■■□□□ 1.5
COL9A3-213ENST00000489045 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.45■■□□□ 1.5
COL9A3-213ENST00000489045 HMGXB4Q9UGU5 601 aa24.45■■□□□ 1.5
COL9A3-213ENST00000489045 KIAA1549LQ6ZVL6 1849 aa24.45■■□□□ 1.5
COL9A3-213ENST00000489045 KRT13P13646 458 aa24.44■■□□□ 1.5
COL9A3-213ENST00000489045 PFKLP17858 780 aa24.44■■□□□ 1.5
COL9A3-213ENST00000489045 PSMC2P35998 433 aaKnown RBP24.44■■□□□ 1.5
COL9A3-213ENST00000489045 ASPAP45381 313 aa24.44■■□□□ 1.5
COL9A3-213ENST00000489045 PPP3CCP48454 512 aa24.44■■□□□ 1.5
COL9A3-213ENST00000489045 GCLMP48507 274 aa24.44■■□□□ 1.5
COL9A3-213ENST00000489045 NDST1P52848 882 aa24.44■■□□□ 1.5
COL9A3-213ENST00000489045 NUCB2P80303 420 aa24.44■■□□□ 1.5
COL9A3-213ENST00000489045 TAF10Q12962 218 aa24.44■■□□□ 1.5
COL9A3-213ENST00000489045 ADAM9Q13443 819 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms