RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 SLC8A3P57103 927 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 ERVFC1P60507 584 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 GPC5P78333 572 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 MLLT1Q03111 559 aaPredicted RBP16.91■□□□□ 0.3
CLDN11-208ENST00000488989 KIF5AQ12840 1032 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 CAMK1Q14012 370 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 PDE12Q6L8Q7 609 aaKnown RBP16.91■□□□□ 0.3
CLDN11-208ENST00000488989 RNF19BQ6ZMZ0 732 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 TMC7Q7Z402 723 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 PIGZQ86VD9 579 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 ZNF461Q8TAF7 563 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 ATRIPQ8WXE1 791 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 CTNNBL1Q8WYA6 563 aaPredicted RBP16.91■□□□□ 0.3
CLDN11-208ENST00000488989 PPP1R13BQ96KQ4 1090 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 C11orf70Q9BRQ4 267 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 TSGA10Q9BZW7 698 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 MIS12Q9H081 205 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 THAP2Q9H0W7 228 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 NGRNQ9NPE2 291 aaKnown RBP16.91■□□□□ 0.3
CLDN11-208ENST00000488989 DMAP1Q9NPF5 467 aaPredicted RBP16.91■□□□□ 0.3
CLDN11-208ENST00000488989 MAFFQ9ULX9 164 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 CHD9Q3L8U1 2897 aa16.91■□□□□ 0.3
CLDN11-208ENST00000488989 TCRBV5S1A1TA0A578 114 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 USP27XA6NNY8 438 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 GRM6O15303 877 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 TEX28O15482 410 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 GABBR2O75899 941 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 CXCL14O95715 111 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 CYP2F1P24903 491 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 MAP3K7CLP57077 242 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 SNX16P57768 344 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 GPM6BQ13491 265 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 ZNF268Q14587 947 aaPredicted RBP16.9■□□□□ 0.3
CLDN11-208ENST00000488989 SMC1AQ14683 1233 aaKnown RBP16.9■□□□□ 0.3
CLDN11-208ENST00000488989 RAB41Q5JT25 222 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 PPP2R2DQ66LE6 453 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 CHRDL2Q6WN34 429 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 MMS22LQ6ZRQ5 1243 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 MRPL43Q8N983 215 aaKnown RBP16.9■□□□□ 0.3
CLDN11-208ENST00000488989 ATAD1Q8NBU5 361 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 AUTS2Q8WXX7 1259 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 C18orf8Q96DM3 657 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 ARHGEF26Q96DR7 871 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 C8orf48Q96LL4 319 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 TCF25Q9BQ70 676 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 RHOBTB2Q9BYZ6 727 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 LMAN2LQ9H0V9 348 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 TRMT1Q9NXH9 659 aaKnown RBP16.9■□□□□ 0.3
CLDN11-208ENST00000488989 ABI2Q9NYB9 513 aaPredicted RBP16.9■□□□□ 0.3
CLDN11-208ENST00000488989 WDR35Q9P2L0 1181 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 STRIP2Q9ULQ0 834 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 TFR2Q9UP52 801 aa16.9■□□□□ 0.3
CLDN11-208ENST00000488989 RANBP2P49792 3224 aaKnown RBP16.9■□□□□ 0.3
CLDN11-208ENST00000488989 CHD7Q9P2D1 2997 aa16.89■□□□□ 0.3
CLDN11-208ENST00000488989 COL4A4P53420 1690 aaPredicted RBP16.89■□□□□ 0.29
CLDN11-208ENST00000488989 C2orf71A6NGG8 1288 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 KRT86O43790 486 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 MTA2O94776 668 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 C1RP00736 705 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 ERBB2P04626 1255 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 CNPP09543 421 aaKnown RBP16.89■□□□□ 0.29
CLDN11-208ENST00000488989 HAPLN1P10915 354 aaPredicted RBP16.89■□□□□ 0.29
CLDN11-208ENST00000488989 ATF2P15336 505 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 ABCB4P21439 1286 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 RRM1P23921 792 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 DNAJB2P25686 324 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 HADHBP55084 474 aaKnown RBP16.89■□□□□ 0.29
CLDN11-208ENST00000488989 ARPP19P56211 112 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 LIN9Q5TKA1 542 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 PLEKHA7Q6IQ23 1121 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 RHOT2Q8IXI1 618 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 IPO4Q8TEX9 1081 aaKnown RBP16.89■□□□□ 0.29
CLDN11-208ENST00000488989 RFFLQ8WZ73 363 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 ZNF653Q96CK0 615 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 MCRS1Q96EZ8 462 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 CEP295NLQ96MC4 621 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 PGLYRP2Q96PD5 576 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 KLHL5Q96PQ7 755 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 KCNK16Q96T55 309 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 CRISPLD1Q9H336 500 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 SLC28A3Q9HAS3 691 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 ENTPD7Q9NQZ7 604 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 TJP2Q9UDY2 1190 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 CNOT8Q9UFF9 292 aaKnown RBP16.89■□□□□ 0.29
CLDN11-208ENST00000488989 MTUS1Q9ULD2 1270 aa16.89■□□□□ 0.29
CLDN11-208ENST00000488989 MYO16Q9Y6X6 1858 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.88■□□□□ 0.29
CLDN11-208ENST00000488989 E5RJQ4 531 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 F8VP50 259 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 TRIM66O15016 1216 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 ABL1P00519 1130 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 SCNN1AP37088 669 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 RGS7P49802 495 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 LRIT3Q3SXY7 679 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 LILRA6Q6PI73 481 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 XYLT1Q86Y38 959 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 ZDHHC17Q8IUH5 632 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 SCML4Q8N228 414 aa16.88■□□□□ 0.29
CLDN11-208ENST00000488989 C17orf53Q8N3J3 647 aaPredicted RBP16.88■□□□□ 0.29
CLDN11-208ENST00000488989 RNF10Q8N5U6 811 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms