RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 RFC1P35251 1148 aaPredicted RBP11.51□□□□□ -0.57
COL21A1-211ENST00000488912 MARCKSL1P49006 195 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 CACNA2D1P54289 1103 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 VARS2Q5ST30 1063 aaKnown RBP11.51□□□□□ -0.57
COL21A1-211ENST00000488912 FAM102AQ5T9C2 384 aaPredicted RBP11.51□□□□□ -0.57
COL21A1-211ENST00000488912 FUT10Q6P4F1 479 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 PIGZQ86VD9 579 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 LRRTM3Q86VH5 581 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 CEP57Q86XR8 500 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 CREG2Q8IUH2 290 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 JOSD2Q8TAC2 188 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 KRT35Q92764 455 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 CD101Q93033 1021 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 EHD2Q9NZN4 543 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 FEZ2Q9UHY8 353 aaPredicted RBP11.51□□□□□ -0.57
COL21A1-211ENST00000488912 PATJQ8NI35 1801 aa11.51□□□□□ -0.57
COL21A1-211ENST00000488912 PDE2AO00408 941 aaPredicted RBP11.5□□□□□ -0.57
COL21A1-211ENST00000488912 PAPSS1O43252 624 aaPredicted RBP11.5□□□□□ -0.57
COL21A1-211ENST00000488912 PROSCO94903 275 aa11.5□□□□□ -0.57
COL21A1-211ENST00000488912 OR4Q2P0C623 313 aa11.5□□□□□ -0.57
COL21A1-211ENST00000488912 RPL34P49207 117 aaKnown RBP11.5□□□□□ -0.57
COL21A1-211ENST00000488912 ALDH7A1P49419 539 aaKnown RBP11.5□□□□□ -0.57
COL21A1-211ENST00000488912 MAP3K7CLP57077 242 aa11.5□□□□□ -0.57
COL21A1-211ENST00000488912 TSPY1Q01534 308 aa11.5□□□□□ -0.57
COL21A1-211ENST00000488912 TAP1Q03518 808 aa11.5□□□□□ -0.57
COL21A1-211ENST00000488912 FPGSQ05932 587 aa11.5□□□□□ -0.57
COL21A1-211ENST00000488912 OR6B2Q6IFH4 312 aa11.5□□□□□ -0.57
COL21A1-211ENST00000488912 OLFML1Q6UWY5 402 aa11.5□□□□□ -0.57
COL21A1-211ENST00000488912 SCUBE3Q8IX30 993 aa11.5□□□□□ -0.57
COL21A1-211ENST00000488912 EMC1Q8N766 993 aa11.5□□□□□ -0.57
COL21A1-211ENST00000488912 MNS1Q8NEH6 495 aa11.5□□□□□ -0.57
COL21A1-211ENST00000488912 ALG3Q92685 438 aa11.5□□□□□ -0.57
COL21A1-211ENST00000488912 MS4A14Q96JA4 679 aa11.5□□□□□ -0.57
COL21A1-211ENST00000488912 MIS12Q9H081 205 aa11.5□□□□□ -0.57
COL21A1-211ENST00000488912 SMARCAL1Q9NZC9 954 aa11.5□□□□□ -0.57
COL21A1-211ENST00000488912 ZBBXA8MT70 800 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 AP1G2O75843 785 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 LCP1P13796 627 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 FGFR3P22607 806 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 RABGGTBP53611 331 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 EPHB4P54760 987 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 SLC8A3P57103 927 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 PPIGQ13427 754 aaKnown RBP eCLIP11.49□□□□□ -0.57
COL21A1-211ENST00000488912 DCAF12L1Q5VU92 463 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 ZNF365Q70YC5 407 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 CLEC4CQ8WTT0 213 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 SMARCD1Q96GM5 515 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 KCNK16Q96T55 309 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 SMOQ99835 787 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 IP6K2Q9UHH9 426 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 MIF4GDA9UHW6 222 aaKnown RBP11.49□□□□□ -0.57
COL21A1-211ENST00000488912 SYN1P17600 705 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 CTNNA1P35221 906 aaKnown RBP11.49□□□□□ -0.57
COL21A1-211ENST00000488912 TAF5Q15542 800 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 RTP2Q5QGT7 225 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 CEP112Q8N8E3 955 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 ZMIZ2Q8NF64 920 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.49□□□□□ -0.57
COL21A1-211ENST00000488912 HSFY1Q96LI6 401 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 CYLDQ9NQC7 956 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 USTQ9Y2C2 406 aa11.49□□□□□ -0.57
COL21A1-211ENST00000488912 F8VP50 259 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 GRAP2O75791 330 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 FGBP02675 491 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 BDNFP23560 247 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 MAN1A1P33908 653 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 SLC1A1P43005 524 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 ACADSBP45954 432 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 SNX16P57768 344 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 RNASE9P60153 205 aaKnown RBP11.48□□□□□ -0.57
COL21A1-211ENST00000488912 ADIGQ0VDE8 80 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 ELAVL2Q12926 359 aaKnown RBP11.48□□□□□ -0.57
COL21A1-211ENST00000488912 MRPL58Q14197 206 aaKnown RBP11.48□□□□□ -0.57
COL21A1-211ENST00000488912 BTG3Q14201 252 aaPredicted RBP11.48□□□□□ -0.57
COL21A1-211ENST00000488912 MAPRE1Q15691 268 aaKnown RBP11.48□□□□□ -0.57
COL21A1-211ENST00000488912 CTXN3Q4LDR2 81 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 SLC39A12Q504Y0 691 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 SPOUT1Q5T280 376 aaKnown RBP11.48□□□□□ -0.57
COL21A1-211ENST00000488912 TRNP1Q6NT89 227 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 TAS1R1Q7RTX1 841 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 CMTR2Q8IYT2 770 aaKnown RBP11.48□□□□□ -0.57
COL21A1-211ENST00000488912 YME1L1Q96TA2 773 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 VN1R3Q9BXE9 311 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 ZCWPW1Q9H0M4 648 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 CXXC1Q9P0U4 656 aaPredicted RBP11.48□□□□□ -0.57
COL21A1-211ENST00000488912 TMEM59LQ9UK28 342 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 MRPL42Q9Y6G3 142 aaKnown RBP11.48□□□□□ -0.57
COL21A1-211ENST00000488912 CES2O00748 559 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 TADA3O75528 432 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 PSMA2P25787 234 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 CTNNA2P26232 953 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 FLT3P36888 993 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 PEX5P50542 639 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 TAS2R40P59535 323 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 SLC6A3Q01959 620 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 CKAP4Q07065 602 aaKnown RBP11.48□□□□□ -0.57
COL21A1-211ENST00000488912 ZNF280DQ6N043 979 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 KCNT2Q6UVM3 1135 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 GPRIN1Q7Z2K8 1008 aa11.48□□□□□ -0.57
COL21A1-211ENST00000488912 ZDHHC17Q8IUH5 632 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms