RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 BNIP1Q12981 228 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 MKRN3Q13064 507 aaKnown RBP13.29□□□□□ -0.28
CLIC4-202ENST00000488683 MORF4L2Q15014 288 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 MTFR1Q15390 333 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 PLEKHG4Q58EX7 1191 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 FAM102AQ5T9C2 384 aaPredicted RBP13.29□□□□□ -0.28
CLIC4-202ENST00000488683 XYLT1Q86Y38 959 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 SLC4A11Q8NBS3 891 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 HEXIM2Q96MH2 286 aaKnown RBP13.29□□□□□ -0.28
CLIC4-202ENST00000488683 PGLYRP2Q96PD5 576 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 SMC6Q96SB8 1091 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 FDXACB1Q9BRP7 624 aaPredicted RBP13.29□□□□□ -0.28
CLIC4-202ENST00000488683 XPO7Q9UIA9 1087 aaKnown RBP13.29□□□□□ -0.28
CLIC4-202ENST00000488683 RABGEF1Q9UJ41 708 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 FARP1Q9Y4F1 1045 aaPredicted RBP13.29□□□□□ -0.28
CLIC4-202ENST00000488683 HEY1Q9Y5J3 304 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 ACTL7BQ9Y614 415 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 IGKV6-21A0A0C4DH24 114 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 PPEF2O14830 753 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 MICAL2O94851 1124 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 TOP3BO95985 862 aaKnown RBP13.28□□□□□ -0.28
CLIC4-202ENST00000488683 ZNF286BP0CG31 522 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 MPZL3Q6UWV2 235 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 PRPF39Q86UA1 669 aaKnown RBP13.28□□□□□ -0.28
CLIC4-202ENST00000488683 RFWD2Q8NHY2 731 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 DENND1AQ8TEH3 1009 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 PAFAH2Q99487 392 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 B3GNT5Q9BYG0 378 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 ZNF518BQ9C0D4 1074 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 ZNF395Q9H8N7 513 aaPredicted RBP13.28□□□□□ -0.28
CLIC4-202ENST00000488683 UBN1Q9NPG3 1134 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.28□□□□□ -0.28
CLIC4-202ENST00000488683 FAM49BQ9NUQ9 324 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 GPRC5DQ9NZD1 345 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 KLHL14Q9P2G3 628 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 MYO18AQ92614 2054 aaKnown RBP13.28□□□□□ -0.28
CLIC4-202ENST00000488683 ALOX15BO15296 676 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 UGT1A9O60656 530 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 POLR2BP30876 1174 aaKnown RBP13.28□□□□□ -0.28
CLIC4-202ENST00000488683 EIF3EP60228 445 aaKnown RBP13.28□□□□□ -0.28
CLIC4-202ENST00000488683 IL9RQ01113 521 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 ZBTB8OSQ8IWT0 167 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 SPATA18Q8TC71 538 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 CCHCR1Q8TD31 782 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 N4BP2L2Q92802 583 aaPredicted RBP13.28□□□□□ -0.28
CLIC4-202ENST00000488683 FOXP3Q9BZS1 431 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 UGT1A7Q9HAW7 530 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 UGT1A10Q9HAW8 530 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 UGT1A8Q9HAW9 530 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 PCDH9Q9HC56 1237 aa13.28□□□□□ -0.28
CLIC4-202ENST00000488683 H0Y3Z8 333 aa13.27□□□□□ -0.28
CLIC4-202ENST00000488683 TNNC2P02585 160 aa13.27□□□□□ -0.28
CLIC4-202ENST00000488683 RBP3P10745 1247 aa13.27□□□□□ -0.28
CLIC4-202ENST00000488683 ELK3P41970 407 aa13.27□□□□□ -0.28
CLIC4-202ENST00000488683 CA9Q16790 459 aa13.27□□□□□ -0.28
CLIC4-202ENST00000488683 TSHZ1Q6ZSZ6 1077 aa13.27□□□□□ -0.28
CLIC4-202ENST00000488683 CENPUQ71F23 418 aa13.27□□□□□ -0.28
CLIC4-202ENST00000488683 OTOAQ7RTW8 1153 aa13.27□□□□□ -0.28
CLIC4-202ENST00000488683 LRRC6Q86X45 466 aa13.27□□□□□ -0.28
CLIC4-202ENST00000488683 VSIG1Q86XK7 387 aa13.27□□□□□ -0.28
CLIC4-202ENST00000488683 TCP10LQ8TDR4 215 aa13.27□□□□□ -0.28
CLIC4-202ENST00000488683 CFAP36Q96G28 342 aa13.27□□□□□ -0.28
CLIC4-202ENST00000488683 DDX56Q9NY93 547 aaKnown RBP13.27□□□□□ -0.28
CLIC4-202ENST00000488683 NKX1-2Q9UD57 310 aaPredicted RBP13.27□□□□□ -0.28
CLIC4-202ENST00000488683 HES2Q9Y543 173 aa13.27□□□□□ -0.28
CLIC4-202ENST00000488683 SIGLEC16A6NMB1 481 aa13.27□□□□□ -0.29
CLIC4-202ENST00000488683 E5RJQ4 531 aa13.27□□□□□ -0.29
CLIC4-202ENST00000488683 CNMDO75829 334 aa13.27□□□□□ -0.29
CLIC4-202ENST00000488683 STAG3L1P0CL83 205 aa13.27□□□□□ -0.29
CLIC4-202ENST00000488683 PHKA2P46019 1235 aa13.27□□□□□ -0.29
CLIC4-202ENST00000488683 CDH6P55285 790 aa13.27□□□□□ -0.29
CLIC4-202ENST00000488683 IRX3P78415 501 aaPredicted RBP13.27□□□□□ -0.29
CLIC4-202ENST00000488683 MXD4Q14582 209 aaPredicted RBP13.27□□□□□ -0.29
CLIC4-202ENST00000488683 PREPLQ4J6C6 727 aaPredicted RBP13.27□□□□□ -0.29
CLIC4-202ENST00000488683 ZNF667Q5HYK9 610 aa13.27□□□□□ -0.29
CLIC4-202ENST00000488683 GLRA4Q5JXX5 417 aa13.27□□□□□ -0.29
CLIC4-202ENST00000488683 HHATQ5VTY9 493 aa13.27□□□□□ -0.29
CLIC4-202ENST00000488683 PPP1R21Q6ZMI0 780 aa13.27□□□□□ -0.29
CLIC4-202ENST00000488683 RIBC1Q8N443 379 aaPredicted RBP13.27□□□□□ -0.29
CLIC4-202ENST00000488683 CLEC4CQ8WTT0 213 aa13.27□□□□□ -0.29
CLIC4-202ENST00000488683 ANKRD36BP1Q96IX9 119 aa13.27□□□□□ -0.29
CLIC4-202ENST00000488683 RXFP1Q9HBX9 757 aa13.27□□□□□ -0.29
CLIC4-202ENST00000488683 SHOC2Q9UQ13 582 aa13.27□□□□□ -0.29
CLIC4-202ENST00000488683 ACKR2O00590 384 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 B4GALT4O60513 344 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 TGFB3P10600 412 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 GMPRP36959 345 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 OR6B2Q6IFH4 312 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 POLNQ7Z5Q5 900 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 TDRPQ86YL5 185 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 PALM2Q8IXS6 379 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 SERAC1Q96JX3 654 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 TTC25Q96NG3 672 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 MECRQ9BV79 373 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 MIS12Q9H081 205 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 FZD8Q9H461 694 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 SLC17A6Q9P2U8 582 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 USP18Q9UMW8 372 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 MFHAS1Q9Y4C4 1052 aa13.26□□□□□ -0.29
CLIC4-202ENST00000488683 DIAPH2O60879 1101 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms