RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 TCF3P15923 654 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 OPRD1P41143 372 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 IFNAR2P48551 515 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 CASP5P51878 434 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 DGKEP52429 567 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 MYL7Q01449 175 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 PSMD2Q13200 908 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 RABEP1Q15276 862 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 SOWAHAQ2M3V2 549 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 L1TD1Q5T7N2 865 aaKnown RBP12.17□□□□□ -0.46
SNU13-208ENST00000488571 FAM171BQ6P995 826 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 LIMS2Q7Z4I7 341 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 RASSF3Q86WH2 238 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 TMEM86AQ8N2M4 240 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 CSGALNACT2Q8N6G5 542 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 SPATA18Q8TC71 538 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 USP33Q8TEY7 942 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 EXOC4Q96A65 974 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 FUBP3Q96I24 572 aaKnown RBP eCLIP12.17□□□□□ -0.46
SNU13-208ENST00000488571 FGFBP2Q9BYJ0 223 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 MRPL44Q9H9J2 332 aaKnown RBP12.17□□□□□ -0.46
SNU13-208ENST00000488571 TBC1D7Q9P0N9 293 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 ITGA11Q9UKX5 1188 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 WASF3Q9UPY6 502 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 SNX9Q9Y5X1 595 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 THADAQ6YHU6 1953 aa12.17□□□□□ -0.46
SNU13-208ENST00000488571 TNRC6BQ9UPQ9 1833 aaKnown RBP12.16□□□□□ -0.46
SNU13-208ENST00000488571 GOLGA8IPA6NC78 632 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 MYMKA6NI61 221 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 GOLGA8JA6NMD2 632 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 PROS1P07225 676 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 BCKDHBP21953 392 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 GBP1P32455 592 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 MAGEA11P43364 429 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 LHX1P48742 406 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 NOVA1P51513 510 aaKnown RBP12.16□□□□□ -0.46
SNU13-208ENST00000488571 TSR1Q2NL82 804 aaKnown RBP12.16□□□□□ -0.46
SNU13-208ENST00000488571 ERICH6BQ5W0A0 696 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 LARP1BQ659C4 914 aaKnown RBP12.16□□□□□ -0.46
SNU13-208ENST00000488571 BRAPQ7Z569 592 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 SPATA2LQ8IUW3 424 aaPredicted RBP12.16□□□□□ -0.46
SNU13-208ENST00000488571 SCN4BQ8IWT1 228 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 ADGRF2Q8IZF7 708 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 TOP6BLQ8N6T0 577 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 FSIP1Q8NA03 581 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 TSTD1Q8NFU3 115 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 CACTINQ8WUQ7 758 aaKnown RBP12.16□□□□□ -0.46
SNU13-208ENST00000488571 KBTBD7Q8WVZ9 684 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 ACCSQ96QU6 501 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 CBWD1Q9BRT8 395 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 TPSD1Q9BZJ3 242 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 MTMR12Q9C0I1 747 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 PDE11AQ9HCR9 933 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 RBAKQ9NYW8 714 aaPredicted RBP12.16□□□□□ -0.46
SNU13-208ENST00000488571 SEL1LQ9UBV2 794 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 STK17AQ9UEE5 414 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 ARHGAP26Q9UNA1 814 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 EXOC7Q9UPT5 735 aa12.16□□□□□ -0.46
SNU13-208ENST00000488571 PTPRJQ12913 1337 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 SPEGQ15772 3267 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 C1QTNF9BB2RNN3 333 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 PATE3B3GLJ2 98 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 CDX4O14627 284 aaPredicted RBP12.15□□□□□ -0.46
SNU13-208ENST00000488571 MAP3K7O43318 606 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 GCNT3O95395 438 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 LDHAP00338 332 aaKnown RBP12.15□□□□□ -0.46
SNU13-208ENST00000488571 KRT19P08727 400 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 C1QTNF9P0C862 333 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 HNRNPLP14866 589 aaKnown RBP eCLIP12.15□□□□□ -0.46
SNU13-208ENST00000488571 GAP43P17677 238 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 HDCP19113 662 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 GARTP22102 1010 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 LMO2P25791 158 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 PCSK1P29120 753 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 SEC13P55735 322 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 USP46P62068 366 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 PSMC1P62191 440 aaKnown RBP12.15□□□□□ -0.46
SNU13-208ENST00000488571 RBP5P82980 135 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 MESP2Q0VG99 397 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 NR1H3Q13133 447 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 KCNB1Q14721 858 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 C2orf27AQ580R0 203 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 LMBRD2Q68DH5 695 aaPredicted RBP12.15□□□□□ -0.46
SNU13-208ENST00000488571 ANO7Q6IWH7 933 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 LAPTM4BQ86VI4 370 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 SFTPA1Q8IWL2 248 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 CNOT6LQ96LI5 555 aaKnown RBP12.15□□□□□ -0.46
SNU13-208ENST00000488571 SYT15Q9BQS2 421 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 CRTAC1Q9NQ79 661 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 OLFML3Q9NRN5 406 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 FBXO2Q9UK22 296 aaPredicted RBP12.15□□□□□ -0.46
SNU13-208ENST00000488571 MMP17Q9ULZ9 603 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 SMC3Q9UQE7 1217 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 CLIC4Q9Y696 253 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 WDFY3Q8IZQ1 3526 aa12.15□□□□□ -0.46
SNU13-208ENST00000488571 ZZEF1O43149 2961 aa12.14□□□□□ -0.47
SNU13-208ENST00000488571 FRMD3A2A2Y4 597 aa12.14□□□□□ -0.47
SNU13-208ENST00000488571 TULP1O00294 542 aaPredicted RBP12.14□□□□□ -0.47
SNU13-208ENST00000488571 NFATC1O95644 943 aa12.14□□□□□ -0.47
SNU13-208ENST00000488571 TOP3BO95985 862 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms