RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 DENND4AQ7Z401 1863 aa16.65■□□□□ 0.26
C9orf3-219ENST00000488186 NOL4O94818 638 aa16.65■□□□□ 0.26
C9orf3-219ENST00000488186 NPR3P17342 541 aa16.65■□□□□ 0.26
C9orf3-219ENST00000488186 BRD2P25440 801 aaKnown RBP16.65■□□□□ 0.26
C9orf3-219ENST00000488186 GBP2P32456 591 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-219ENST00000488186 STAT1P42224 750 aa16.65■□□□□ 0.26
C9orf3-219ENST00000488186 CNGA2Q16280 664 aa16.65■□□□□ 0.26
C9orf3-219ENST00000488186 PTPN21Q16825 1174 aa16.65■□□□□ 0.26
C9orf3-219ENST00000488186 DPY19L2P1Q6NXN4 242 aa16.65■□□□□ 0.26
C9orf3-219ENST00000488186 GET4Q7L5D6 327 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-219ENST00000488186 OTOP3Q7RTS5 596 aa16.65■□□□□ 0.26
C9orf3-219ENST00000488186 NUP93Q8N1F7 819 aa16.65■□□□□ 0.26
C9orf3-219ENST00000488186 ANKRD52Q8NB46 1076 aa16.65■□□□□ 0.26
C9orf3-219ENST00000488186 RPGRIP1Q96KN7 1286 aa16.65■□□□□ 0.26
C9orf3-219ENST00000488186 UHRF1Q96T88 793 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-219ENST00000488186 SMOQ99835 787 aa16.65■□□□□ 0.26
C9orf3-219ENST00000488186 NAA15Q9BXJ9 866 aaKnown RBP16.65■□□□□ 0.26
C9orf3-219ENST00000488186 COL25A1Q9BXS0 654 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-219ENST00000488186 RBSNQ9H1K0 784 aa16.65■□□□□ 0.26
C9orf3-219ENST00000488186 AJAP1Q9UKB5 411 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-219ENST00000488186 TSPAN16Q9UKR8 245 aa16.65■□□□□ 0.26
C9orf3-219ENST00000488186 M0QYV0 167 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 RTN3O95197 1032 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-219ENST00000488186 CALCAP01258 141 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 SP100P23497 879 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-219ENST00000488186 GABRR2P28476 465 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 CDC25CP30307 473 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 KRT9P35527 623 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 ZNF132P52740 706 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 CACNA2D1P54289 1103 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 BCAT1P54687 386 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 ZP2Q05996 745 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 MTMR3Q13615 1198 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 ARHGAP15Q53QZ3 475 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 LCLAT1Q6UWP7 414 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 FAM71AQ8IYT1 594 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 STKLD1Q8NE28 680 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 UBA3Q8TBC4 463 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 FEZF2Q8TBJ5 459 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 NUP58Q9BVL2 599 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 TRIM5Q9C035 493 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 XPO4Q9C0E2 1151 aaKnown RBP16.64■□□□□ 0.25
C9orf3-219ENST00000488186 ATXN3LQ9H3M9 355 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 SLITRK6Q9H5Y7 841 aa16.64■□□□□ 0.25
C9orf3-219ENST00000488186 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.64■□□□□ 0.25
C9orf3-219ENST00000488186 LOC730098B7Z3J9 87 aa16.63■□□□□ 0.25
C9orf3-219ENST00000488186 F8VZ95 297 aa16.63■□□□□ 0.25
C9orf3-219ENST00000488186 O00370 1275 aa16.63■□□□□ 0.25
C9orf3-219ENST00000488186 EPHB6O15197 1021 aa16.63■□□□□ 0.25
C9orf3-219ENST00000488186 GFPT2O94808 682 aa16.63■□□□□ 0.25
C9orf3-219ENST00000488186 CCDC172P0C7W6 258 aa16.63■□□□□ 0.25
C9orf3-219ENST00000488186 PNMA6AP0CW24 399 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-219ENST00000488186 YWHAQP27348 245 aa16.63■□□□□ 0.25
C9orf3-219ENST00000488186 BST2Q10589 180 aaKnown RBP16.63■□□□□ 0.25
C9orf3-219ENST00000488186 CLEC20AQ6ZU45 233 aa16.63■□□□□ 0.25
C9orf3-219ENST00000488186 FMNL3Q8IVF7 1028 aa16.63■□□□□ 0.25
C9orf3-219ENST00000488186 ZNF397Q8NF99 534 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-219ENST00000488186 ZNF606Q8WXB4 792 aa16.63■□□□□ 0.25
C9orf3-219ENST00000488186 TFAP2BQ92481 460 aa16.63■□□□□ 0.25
C9orf3-219ENST00000488186 SLITRK1Q96PX8 696 aa16.63■□□□□ 0.25
C9orf3-219ENST00000488186 FBXO44Q9H4M3 255 aa16.63■□□□□ 0.25
C9orf3-219ENST00000488186 CSNK1G1Q9HCP0 422 aa16.63■□□□□ 0.25
C9orf3-219ENST00000488186 AVENQ9NQS1 362 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-219ENST00000488186 COMMD8Q9NX08 183 aa16.63■□□□□ 0.25
C9orf3-219ENST00000488186 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.63■□□□□ 0.25
C9orf3-219ENST00000488186 DOCK6Q96HP0 2047 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 DOCK8Q8NF50 2099 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 A0A1W2PRU2 124 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 BEST1O76090 585 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 MICAL2O94851 1124 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 ABL1P00519 1130 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 SETSIPP0DME0 302 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 SSTR3P32745 418 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-219ENST00000488186 CLCN1P35523 988 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 SOX5P35711 763 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 PDE6CP51160 858 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 SLC5A3P53794 718 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 ARID5AQ03989 594 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 GAS2L3Q86XJ1 694 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 PLCD3Q8N3E9 789 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 TDRD5Q8NAT2 981 aaKnown RBP16.62■□□□□ 0.25
C9orf3-219ENST00000488186 ITFG1Q8TB96 612 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 ING5Q8WYH8 240 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 MRPS31Q92665 395 aaKnown RBP16.62■□□□□ 0.25
C9orf3-219ENST00000488186 FBXO32Q969P5 355 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 TCEAL4Q96EI5 215 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 TRMT2BQ96GJ1 504 aaKnown RBP16.62■□□□□ 0.25
C9orf3-219ENST00000488186 UBXN6Q9BZV1 441 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 LRRC4Q9HBW1 653 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 ZNF334Q9HCZ1 680 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-219ENST00000488186 TRPM5Q9NZQ8 1165 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 CEP83Q9Y592 693 aa16.62■□□□□ 0.25
C9orf3-219ENST00000488186 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.62■□□□□ 0.25
C9orf3-219ENST00000488186 XPO1O14980 1071 aaKnown RBP16.61■□□□□ 0.25
C9orf3-219ENST00000488186 TPM1P09493 284 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 HMGA1P17096 107 aaKnown RBP16.61■□□□□ 0.25
C9orf3-219ENST00000488186 GJA1P17302 382 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 EPHA5P54756 1037 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 PDE4CQ08493 712 aa16.61■□□□□ 0.25
C9orf3-219ENST00000488186 SLC47A2Q86VL8 602 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms