RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ZNF699Q32M78 642 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 ZNF667Q5HYK9 610 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 DGKKQ5KSL6 1271 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 NAIF1Q69YI7 327 aaPredicted RBP12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 PKN3Q6P5Z2 889 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 VSTM1Q6UX27 236 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 SPEM1Q8N4L4 309 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 GOLGA5Q8TBA6 731 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 SYAP1Q96A49 352 aaPredicted RBP12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 MSANTD3Q96H12 275 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 MED10Q9BTT4 135 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 B3GNT5Q9BYG0 378 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 ZNF518BQ9C0D4 1074 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 XYLT2Q9H1B5 865 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 GOLPH3LQ9H4A5 285 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 TMEM30AQ9NV96 361 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 DMAC2Q9NW81 257 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 DUS2Q9NX74 493 aaKnown RBP12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 GCNT4Q9P109 453 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 USP25Q9UHP3 1055 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 WNT6Q9Y6F9 365 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 DMXL1Q9Y485 3027 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 PDXKO00764 312 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 SCAMP3O14828 347 aaKnown RBP12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 TRIM66O15016 1216 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 LILRB5O75023 590 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 VNN1O95497 513 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 TDGF1P13385 188 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 ATICP31939 592 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 ID4P47928 161 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 IFNAR2P48551 515 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 SRSF5Q13243 272 aaKnown RBP12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 CCINQ13939 588 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 KCNB1Q14721 858 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 PPP2R5DQ14738 602 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 ZNF77Q15935 545 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 SPOPLQ6IQ16 392 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 FSTL4Q6MZW2 842 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 C1orf228Q6PIY5 440 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 PRR23BQ6ZRT6 265 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 B3GALNT2Q8NCR0 500 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 SH3RF2Q8TEC5 729 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 NELL1Q92832 810 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 CCDC47Q96A33 483 aaKnown RBP12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 CHFRQ96EP1 664 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 SPATA17Q96L03 361 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 SDCBP2Q9H190 292 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 LINC00597Q9H2U6 94 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 MMRN2Q9H8L6 949 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 KIF9Q9HAQ2 790 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 FBRSL1Q9HCM7 1045 aaKnown RBP12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 POLR3BQ9NW08 1133 aaPredicted RBP12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 TRPM5Q9NZQ8 1165 aa12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 SMG5Q9UPR3 1016 aaKnown RBP12.04□□□□□ -0.48
NIPAL3-207ENST00000488155 CNOT1A5YKK6 2376 aaKnown RBP12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 SOBPA7XYQ1 873 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 CALUO43852 315 aaPredicted RBP12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 ZNF202O95125 648 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 STAU1O95793 577 aaKnown RBP12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 EGFP01133 1207 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 GJA4P35212 333 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 PXNP49023 591 aaPredicted RBP12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 GALK1P51570 392 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 NRLP54845 237 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 DPYDQ12882 1025 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 TAF10Q12962 218 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 ZNF268Q14587 947 aaPredicted RBP12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 KRBA2Q6ZNG9 492 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 ACOT1Q86TX2 421 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 SLC9A9Q8IVB4 645 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 KCNK16Q96T55 309 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 IER2Q9BTL4 223 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 RNF38Q9H0F5 515 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 ECT2Q9H8V3 914 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 SMPD4Q9NXE4 827 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 FRMD4BQ9Y2L6 1034 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 ATP6V1DQ9Y5K8 247 aa12.03□□□□□ -0.48
NIPAL3-207ENST00000488155 ZNF840PA6NDX5 716 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 K7ESF4 209 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 RNF40O75150 1001 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 HLA-DRAP01903 254 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 TRIM49P0CI25 452 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 TRIM49CP0CI26 452 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 NR2F2P24468 414 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 AP3M2P53677 418 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 ZXDBP98169 803 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 GRSF1Q12849 480 aaKnown RBP eCLIP12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 USP4Q13107 963 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 PDGFRLQ15198 375 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 ZACNQ401N2 412 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 TMEM196Q5HYL7 178 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 MAMSTRQ6ZN01 415 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 SV2AQ7L0J3 742 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 SMYD4Q8IYR2 804 aaPredicted RBP12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 CPA6Q8N4T0 437 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 OSCP1Q8WVF1 389 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 RMDN1Q96DB5 314 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 EEF2KMTQ96G04 330 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 C8orf48Q96LL4 319 aa12.02□□□□□ -0.49
NIPAL3-207ENST00000488155 FAM126AQ9BYI3 521 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms