RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 THAP4Q8WY91 577 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 CFHR4Q92496 578 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 NKD2Q969F2 451 aaPredicted RBP4.03□□□□□ -1.76
HFM1-208ENST00000488023 RADILQ96JH8 1075 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 EIF2AQ9BY44 585 aaKnown RBP4.03□□□□□ -1.76
HFM1-208ENST00000488023 GPR63Q9BZJ6 419 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 CCDC68Q9H2F9 335 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 MANSC1Q9H8J5 431 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 SEPSECSQ9HD40 501 aaKnown RBP4.03□□□□□ -1.76
HFM1-208ENST00000488023 PLSCR4Q9NRQ2 329 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 KCMF1Q9P0J7 381 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 ZNF212Q9UDV6 495 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 HERC5Q9UII4 1024 aaKnown RBP4.03□□□□□ -1.76
HFM1-208ENST00000488023 MED16Q9Y2X0 877 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 RSF1Q96T23 1441 aaPredicted RBP4.03□□□□□ -1.76
HFM1-208ENST00000488023 A0A1W2PR48 441 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 ACTL6BO94805 426 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 LY86O95711 162 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 MYCLP12524 364 aaPredicted RBP4.03□□□□□ -1.76
HFM1-208ENST00000488023 DDCP20711 480 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 FPR1P21462 350 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 COMTP21964 271 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 PCSK1P29120 753 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 HOXD13P35453 343 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 RPS19P39019 145 aaKnown RBP4.03□□□□□ -1.76
HFM1-208ENST00000488023 PER3P56645 1201 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 ATP8B2P98198 1209 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 PCOLCEQ15113 449 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 CSRP2Q16527 193 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 ATP2B3Q16720 1220 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 CCDC92Q53HC0 331 aaPredicted RBP4.03□□□□□ -1.76
HFM1-208ENST00000488023 TMTC4Q5T4D3 741 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 RAP1GAP2Q684P5 730 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 FAM180AQ6UWF9 173 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 LARP4Q71RC2 724 aaKnown RBP eCLIP4.03□□□□□ -1.769e-13■■■□□ 17
HFM1-208ENST00000488023 POLNQ7Z5Q5 900 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 GATAD2AQ86YP4 633 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 PQLC1Q8N2U9 271 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 CHCHD4Q8N4Q1 142 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 ZNF713Q8N859 430 aaPredicted RBP4.03□□□□□ -1.76
HFM1-208ENST00000488023 OR5AN1Q8NGI8 311 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 CEP70Q8NHQ1 597 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 ATP6V1E2Q96A05 226 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 VOPP1Q96AW1 172 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 TWNKQ96RR1 684 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 DDX23Q9BUQ8 820 aaKnown RBP4.03□□□□□ -1.76
HFM1-208ENST00000488023 ZNF518BQ9C0D4 1074 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 OR10A2Q9H208 303 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 EPS8L2Q9H6S3 715 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 TMEM8AQ9HCN3 771 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 PRDM8Q9NQV8 689 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 DNAI1Q9UI46 699 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 MID2Q9UJV3 735 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 VPS28Q9UK41 221 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 CDC42EP3Q9UKI2 254 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 SLC30A1Q9Y6M5 507 aa4.03□□□□□ -1.76
HFM1-208ENST00000488023 CD1AP06126 327 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 FTH1P19P0C7X4 201 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 CALRP27797 417 aaKnown RBP4.02□□□□□ -1.77
HFM1-208ENST00000488023 SREBF1P36956 1147 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 CCT4P50991 539 aaKnown RBP4.02□□□□□ -1.77
HFM1-208ENST00000488023 AP2B1P63010 937 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 VAMP2P63027 116 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 UBE3CQ15386 1083 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 EMC10Q5UCC4 262 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 DCAF12L1Q5VU92 463 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 KIAA1614Q5VZ46 1190 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 CRTC1Q6UUV9 634 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 CCDC150Q8NCX0 1101 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 ADAMTS15Q8TE58 950 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 SNX27Q96L92 541 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 TIGD1Q96MW7 591 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 UHRF1Q96T88 793 aaPredicted RBP4.02□□□□□ -1.77
HFM1-208ENST00000488023 PCDHAC1Q9H158 963 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 C12orf65Q9H3J6 166 aaKnown RBP4.02□□□□□ -1.77
HFM1-208ENST00000488023 NELFAQ9H3P2 528 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 ZMYND8Q9ULU4 1186 aaPredicted RBP4.02□□□□□ -1.77
HFM1-208ENST00000488023 RUVBL1Q9Y265 456 aaKnown RBP4.02□□□□□ -1.77
HFM1-208ENST00000488023 MTO1Q9Y2Z2 717 aaKnown RBP4.02□□□□□ -1.77
HFM1-208ENST00000488023 VWA7Q9Y334 891 aa4.02□□□□□ -1.77
HFM1-208ENST00000488023 LMTK3Q96Q04 1460 aa4.01□□□□□ -1.77
HFM1-208ENST00000488023 A0A087X1B8 175 aa4.01□□□□□ -1.77
HFM1-208ENST00000488023 FAM170AA1A519 330 aa4.01□□□□□ -1.77
HFM1-208ENST00000488023 PMS2P1A4D2B8 440 aa4.01□□□□□ -1.77
HFM1-208ENST00000488023 PABPN1LA6NDY0 278 aaKnown RBP4.01□□□□□ -1.77
HFM1-208ENST00000488023 PRSS29PA6NIE9 313 aa4.01□□□□□ -1.77
HFM1-208ENST00000488023 KRTAP29-1A8MX34 341 aaPredicted RBP4.01□□□□□ -1.77
HFM1-208ENST00000488023 H0Y3Z8 333 aa4.01□□□□□ -1.77
HFM1-208ENST00000488023 DNPH1O43598 174 aa4.01□□□□□ -1.77
HFM1-208ENST00000488023 CDC14BO60729 498 aa4.01□□□□□ -1.77
HFM1-208ENST00000488023 PTP4A3O75365 173 aa4.01□□□□□ -1.77
HFM1-208ENST00000488023 GJB3O75712 270 aa4.01□□□□□ -1.77
HFM1-208ENST00000488023 STARD3NLO95772 234 aa4.01□□□□□ -1.77
HFM1-208ENST00000488023 SBK3P0C264 359 aa4.01□□□□□ -1.77
HFM1-208ENST00000488023 TXNP10599 105 aaKnown RBP4.01□□□□□ -1.77
HFM1-208ENST00000488023 PECAM1P16284 738 aaPredicted RBP4.01□□□□□ -1.77
HFM1-208ENST00000488023 NPPBP16860 134 aa4.01□□□□□ -1.77
HFM1-208ENST00000488023 ALOX12P18054 663 aa4.01□□□□□ -1.77
HFM1-208ENST00000488023 ACO1P21399 889 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms