RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 SLC5A1P13866 664 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 ITPKBP27987 946 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 LRPAP1P30533 357 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 PIK3CBP42338 1070 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 TM4SF4P48230 202 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 PXNP49023 591 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 PRIM2P49643 509 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 UCP3P55916 312 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 FPGSQ05932 587 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 HLXQ14774 488 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 SF3B3Q15393 1217 aaKnown RBP4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 RNF44Q7L0R7 432 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 PEG10Q86TG7 708 aaKnown RBP4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 MORC1Q86VD1 984 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 OR2C3Q8N628 320 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 CELF5Q8N6W0 485 aaKnown RBP4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 FANCBQ8NB91 859 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 DEPTORQ8TB45 409 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 WASF1Q92558 559 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 NELL2Q99435 816 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 TTYH3Q9C0H2 523 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 MS4A7Q9GZW8 240 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 HESX1Q9UBX0 185 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 ZNF212Q9UDV6 495 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 LRCH1Q9Y2L9 728 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 ENTPD2Q9Y5L3 495 aa4.52□□□□□ -1.69
HMGB1P36-201ENST00000487709 SETD1BQ9UPS6 1966 aaKnown RBP4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 PRAMEF33A0A0G2JMD5 474 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 A0A1W2PS29 197 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 APOL1O14791 398 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 YY2O15391 372 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 CCP110O43303 1012 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 PRAMEF10O60809 474 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 DNAJB5O75953 348 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 BMP15O95972 392 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 ANXA2P07355 339 aaKnown RBP4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 SETSIPP0DME0 302 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 TNFSF4P23510 183 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 FOLR3P41439 243 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 HTR3AP46098 478 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 GCLCP48506 637 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 CARSP49589 748 aaKnown RBP4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 NDUFV1P49821 464 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 CASP5P51878 434 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 MAPK10P53779 464 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 RPS16P62249 146 aaKnown RBP4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 TCF15Q12870 199 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 CTBP1Q13363 440 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 MORC3Q14149 939 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 C3orf38Q5JPI3 329 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 KIAA1614Q5VZ46 1190 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 SLC30A10Q6XR72 485 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 PPP1R32Q7Z5V6 425 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 LIX1LQ8IVB5 337 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 ENAHQ8N8S7 591 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 MORC4Q8TE76 937 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 TMEM125Q96AQ2 219 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 SNX22Q96L94 193 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 RIPOR3Q96MK2 946 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 SLC46A1Q96NT5 459 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 TIMP4Q99727 224 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 NAA15Q9BXJ9 866 aaKnown RBP4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 INTS13Q9NVM9 706 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 SLC52A1Q9NWF4 448 aa4.51□□□□□ -1.69
HMGB1P36-201ENST00000487709 SPATA31A3Q5VYP0 1347 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 A0A0B4J269 797 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 AQP7P3A6NL99 342 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 E9PLN8 166 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 F5H697 171 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 TP73O15350 636 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 EIF3JO75822 258 aaKnown RBP4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 PRKCGP05129 697 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 CHRM3P20309 590 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 CD6P30203 668 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 NPTX2P47972 431 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 MTHFSP49914 203 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 PRKAG1P54619 331 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 ZNF543Q08ER8 600 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 TUBB3Q13509 450 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 SLC29A2Q14542 456 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 MTX3Q5HYI7 312 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 GORABQ5T7V8 394 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 TEDDM1Q5T9Z0 273 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 DCAF12L1Q5VU92 463 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 IZUMO3Q5VZ72 239 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 KAZNQ674X7 775 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 MZT2AQ6P582 158 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 C1orf228Q6PIY5 440 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 SESTD1Q86VW0 696 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 SPARTQ8N0X7 666 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 VGLL2Q8N8G2 317 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 ATP11CQ8NB49 1132 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 TFAP2BQ92481 460 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 LTV1Q96GA3 475 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 VKORC1Q9BQB6 163 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 MAGEB5Q9BZ81 275 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 HSFX1Q9UBD0 423 aa4.5□□□□□ -1.69
HMGB1P36-201ENST00000487709 PRSS29PA6NIE9 313 aa4.49□□□□□ -1.69
HMGB1P36-201ENST00000487709 RGS10O43665 173 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms