RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CPB2Q96IY4 423 aa27.37■■□□□ 1.97
HLA-C-208ENST00000487245 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.37■■□□□ 1.97
HLA-C-208ENST00000487245 KLHL14Q9P2G3 628 aa27.37■■□□□ 1.97
HLA-C-208ENST00000487245 BARX2Q9UMQ3 279 aaPredicted RBP27.37■■□□□ 1.97
HLA-C-208ENST00000487245 PLXNA1Q9UIW2 1896 aa27.37■■□□□ 1.97
HLA-C-208ENST00000487245 KDELR1P24390 212 aa27.36■■□□□ 1.97
HLA-C-208ENST00000487245 SPARCL1Q14515 664 aa27.36■■□□□ 1.97
HLA-C-208ENST00000487245 ZC3H12AQ5D1E8 599 aaKnown RBP27.36■■□□□ 1.97
HLA-C-208ENST00000487245 APBB1IPQ7Z5R6 666 aaPredicted RBP27.36■■□□□ 1.97
HLA-C-208ENST00000487245 C16orf70Q9BSU1 422 aa27.36■■□□□ 1.97
HLA-C-208ENST00000487245 METTL5Q9NRN9 209 aaKnown RBP27.36■■□□□ 1.97
HLA-C-208ENST00000487245 RNF8O76064 485 aa27.36■■□□□ 1.97
HLA-C-208ENST00000487245 ERBB2P04626 1255 aa27.36■■□□□ 1.97
HLA-C-208ENST00000487245 PLCB3Q01970 1234 aa27.36■■□□□ 1.97
HLA-C-208ENST00000487245 INCA1Q0VD86 236 aa27.36■■□□□ 1.97
HLA-C-208ENST00000487245 FASTKD3Q14CZ7 662 aaKnown RBP27.36■■□□□ 1.97
HLA-C-208ENST00000487245 GJC2Q5T442 439 aaPredicted RBP27.36■■□□□ 1.97
HLA-C-208ENST00000487245 ZNF410Q86VK4 478 aa27.36■■□□□ 1.97
HLA-C-208ENST00000487245 PPIL6Q8IXY8 311 aa27.36■■□□□ 1.97
HLA-C-208ENST00000487245 NLRP7Q8WX94 980 aa27.36■■□□□ 1.97
HLA-C-208ENST00000487245 HEXIM2Q96MH2 286 aaKnown RBP27.36■■□□□ 1.97
HLA-C-208ENST00000487245 TWNKQ96RR1 684 aa27.36■■□□□ 1.97
HLA-C-208ENST00000487245 ZWILCHQ9H900 591 aa27.36■■□□□ 1.97
HLA-C-208ENST00000487245 NOD2Q9HC29 1040 aa27.36■■□□□ 1.97
HLA-C-208ENST00000487245 ASNSD1Q9NWL6 643 aa27.36■■□□□ 1.97
HLA-C-208ENST00000487245 A0A1B0GUA9 196 aa27.35■■□□□ 1.97
HLA-C-208ENST00000487245 SGK1O00141 431 aa27.35■■□□□ 1.97
HLA-C-208ENST00000487245 VTNP04004 478 aa27.35■■□□□ 1.97
HLA-C-208ENST00000487245 TSHRP16473 764 aa27.35■■□□□ 1.97
HLA-C-208ENST00000487245 GCLCP48506 637 aaPredicted RBP27.35■■□□□ 1.97
HLA-C-208ENST00000487245 STILQ15468 1287 aa27.35■■□□□ 1.97
HLA-C-208ENST00000487245 ZKSCAN8Q15776 578 aaPredicted RBP27.35■■□□□ 1.97
HLA-C-208ENST00000487245 FITM2Q8N6M3 262 aa27.35■■□□□ 1.97
HLA-C-208ENST00000487245 TMEM121Q9BTD3 319 aa27.35■■□□□ 1.97
HLA-C-208ENST00000487245 PITPNM3Q9BZ71 974 aa27.35■■□□□ 1.97
HLA-C-208ENST00000487245 DPP3Q9NY33 737 aa27.35■■□□□ 1.97
HLA-C-208ENST00000487245 PSMC3IPQ9P2W1 217 aaPredicted RBP27.35■■□□□ 1.97
HLA-C-208ENST00000487245 ZMYND8Q9ULU4 1186 aaPredicted RBP27.35■■□□□ 1.97
HLA-C-208ENST00000487245 H3BRB1 525 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 M0QYV0 167 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 ALADP13716 330 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 GPD2P43304 727 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 MYO1EQ12965 1108 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 TBC1D1Q86TI0 1168 aaPredicted RBP27.34■■□□□ 1.97
HLA-C-208ENST00000487245 ZBED8Q8IZ13 594 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 ARFGAP1Q8N6T3 406 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 SMC6Q96SB8 1091 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 TUT1Q9H6E5 874 aaKnown RBP27.34■■□□□ 1.97
HLA-C-208ENST00000487245 VPS37BQ9H9H4 285 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 E7ESA3 106 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 TSPAN1O60635 241 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 CSDE1O75534 798 aaKnown RBP27.34■■□□□ 1.97
HLA-C-208ENST00000487245 CCNB1P14635 433 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 PDIA2Q13087 525 aaKnown RBP27.34■■□□□ 1.97
HLA-C-208ENST00000487245 PKN2Q16513 984 aaKnown RBP27.34■■□□□ 1.97
HLA-C-208ENST00000487245 PDK4Q16654 411 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 HIF1AQ16665 826 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 ASRGL1Q7L266 308 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 CMASQ8NFW8 434 aaPredicted RBP27.34■■□□□ 1.97
HLA-C-208ENST00000487245 ACSF2Q96CM8 615 aaPredicted RBP27.34■■□□□ 1.97
HLA-C-208ENST00000487245 KATNBL1Q9H079 304 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 ARHGEF3Q9NR81 526 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 MORF4L1Q9UBU8 362 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 TJP2Q9UDY2 1190 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 PLXNB2O15031 1838 aa27.34■■□□□ 1.97
HLA-C-208ENST00000487245 POC1B-GALNT4F8VUJ3 575 aa27.33■■□□□ 1.97
HLA-C-208ENST00000487245 PDHXO00330 501 aa27.33■■□□□ 1.97
HLA-C-208ENST00000487245 ZNF286BP0CG31 522 aa27.33■■□□□ 1.97
HLA-C-208ENST00000487245 PHBP35232 272 aa27.33■■□□□ 1.97
HLA-C-208ENST00000487245 PCK1P35558 622 aa27.33■■□□□ 1.97
HLA-C-208ENST00000487245 GRM5P41594 1212 aa27.33■■□□□ 1.97
HLA-C-208ENST00000487245 OTUD4Q01804 1114 aaKnown RBP27.33■■□□□ 1.97
HLA-C-208ENST00000487245 DCAF4L1Q3SXM0 396 aa27.33■■□□□ 1.97
HLA-C-208ENST00000487245 NAT8LQ8N9F0 302 aa27.33■■□□□ 1.97
HLA-C-208ENST00000487245 ACTL9Q8TC94 416 aa27.33■■□□□ 1.97
HLA-C-208ENST00000487245 RMDN2Q96LZ7 410 aa27.33■■□□□ 1.97
HLA-C-208ENST00000487245 DERAQ9Y315 318 aa27.33■■□□□ 1.97
HLA-C-208ENST00000487245 HOXD8P13378 290 aaPredicted RBP27.32■■□□□ 1.96
HLA-C-208ENST00000487245 IL1R2P27930 398 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 ADCYAP1R1P41586 468 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 ARL4CP56559 192 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 MGAT5Q09328 741 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 LCLAT1Q6UWP7 414 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 HAUS1Q96CS2 278 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 DHRS4Q9BTZ2 278 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 PLEKHA5Q9HAU0 1116 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 HMGXB4Q9UGU5 601 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 TYROBPO43914 113 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 CST8O60676 142 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 GEMIN4P57678 1058 aaKnown RBP27.32■■□□□ 1.96
HLA-C-208ENST00000487245 GPX6P59796 221 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 CDC42EP1Q00587 391 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 GRIK4Q16099 956 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 ECHDC2Q86YB7 292 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 KIAA0319LQ8IZA0 1049 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 ATP11CQ8NB49 1132 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 KCTD6Q8NC69 237 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 CPT1BQ92523 772 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 PPP1R16BQ96T49 567 aa27.32■■□□□ 1.96
HLA-C-208ENST00000487245 RABGEF1Q9UJ41 708 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms