RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 GJB6O95452 261 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 PDGFRBP09619 1106 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 NPR3P17342 541 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 MAPRE1Q15691 268 aaKnown RBP12.22□□□□□ -0.45
PRKCB-207ENST00000486868 PLEKHG4Q58EX7 1191 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 TFDP3Q5H9I0 405 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 EFHC1Q5JVL4 640 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 ALS2CLQ60I27 953 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 AADACL2Q6P093 401 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 CCDC137Q6PK04 289 aaKnown RBP12.22□□□□□ -0.45
PRKCB-207ENST00000486868 CD300LGQ6UXG3 332 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 ANKRD33Q7Z3H0 272 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 JAMLQ86YT9 394 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 FUKQ8N0W3 1084 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 TTC13Q8NBP0 860 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 ATL2Q8NHH9 583 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 SLC2A14Q8TDB8 520 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 TEKT4Q8WW24 435 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 KHSRPQ92945 711 aaKnown RBP eCLIP12.22□□□□□ -0.45
PRKCB-207ENST00000486868 SLITRK1Q96PX8 696 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 SYT15Q9BQS2 421 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 DCLK3Q9C098 648 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 PRDM16Q9HAZ2 1276 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 ST7Q9NRC1 585 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 TMEM51Q9NW97 253 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 DDX43Q9NXZ2 648 aaKnown RBP12.22□□□□□ -0.45
PRKCB-207ENST00000486868 TJP2Q9UDY2 1190 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 DRG1Q9Y295 367 aaKnown RBP12.22□□□□□ -0.45
PRKCB-207ENST00000486868 USTQ9Y2C2 406 aa12.22□□□□□ -0.45
PRKCB-207ENST00000486868 FAM170AA1A519 330 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 NDC80O14777 642 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 TTI1O43156 1089 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 ZMYND10O75800 440 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 ECEL1O95672 775 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 TRUB2O95900 331 aaKnown RBP12.21□□□□□ -0.45
PRKCB-207ENST00000486868 CXCL10P02778 98 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 MYBL2P10244 700 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 RALAP11233 206 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 PDGFRAP16234 1089 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 CDKN2BP42772 138 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 CARSP49589 748 aaKnown RBP12.21□□□□□ -0.45
PRKCB-207ENST00000486868 SMC1AQ14683 1233 aaKnown RBP12.21□□□□□ -0.45
PRKCB-207ENST00000486868 TIGD5Q53EQ6 642 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 ODF2Q5BJF6 829 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 NOMO2Q5JPE7 1267 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 FAM171BQ6P995 826 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 SPOCD1Q6ZMY3 1216 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 PAQR9Q6ZVX9 377 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 ARFGAP1Q8N6T3 406 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 MYCBPAPQ8TBZ2 947 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 CCHCR1Q8TD31 782 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 RXFP2Q8WXD0 754 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 LINC01599Q8WXQ3 324 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 SEPT8Q92599 483 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 CENPIQ92674 756 aaPredicted RBP12.21□□□□□ -0.45
PRKCB-207ENST00000486868 LRRC45Q96CN5 670 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 C11orf84Q9BUA3 381 aaPredicted RBP12.21□□□□□ -0.45
PRKCB-207ENST00000486868 DDX23Q9BUQ8 820 aaKnown RBP12.21□□□□□ -0.45
PRKCB-207ENST00000486868 CRISPLD2Q9H0B8 497 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 PNPLA8Q9NP80 782 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 FAM49BQ9NUQ9 324 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 RNF19AQ9NV58 838 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 USP18Q9UMW8 372 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 PCDHB8Q9UN66 801 aa12.21□□□□□ -0.45
PRKCB-207ENST00000486868 hCG_1818297A0A087WSY0 165 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 CASTOR2A6NHX0 329 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 C3orf70A6NLC5 250 aaPredicted RBP12.2□□□□□ -0.46
PRKCB-207ENST00000486868 HSF2BPO75031 334 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 GABBR2O75899 941 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 B3GAT3O94766 335 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 KRT1P04264 644 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 FAM200BP0CF97 657 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 CCL5P13501 91 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 CCDC130P13994 396 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 ECHS1P30084 290 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 MIPP30301 263 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 SDC4P31431 198 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 HSPA9P38646 679 aaKnown RBP12.2□□□□□ -0.46
PRKCB-207ENST00000486868 SSR1P43307 286 aaKnown RBP12.2□□□□□ -0.46
PRKCB-207ENST00000486868 AFF1P51825 1210 aaKnown RBP12.2□□□□□ -0.46
PRKCB-207ENST00000486868 PDK2Q15119 407 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 MFSD7Q6UXD7 560 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 STRADAQ7RTN6 431 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 PIGZQ86VD9 579 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 PSTKQ8IV42 348 aaKnown RBP12.2□□□□□ -0.46
PRKCB-207ENST00000486868 CCDC50Q8IVM0 306 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 MAP7D3Q8IWC1 876 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 CCDC105Q8IYK2 499 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 THEM5Q8N1Q8 247 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 C3orf58Q8NDZ4 430 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 FAM71BQ8TC56 605 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 SH3TC2Q8TF17 1288 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 TSPYL1Q9H0U9 437 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 CSNK1G1Q9HCP0 422 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 MED4Q9NPJ6 270 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 CRTAC1Q9NQ79 661 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 WBP1LQ9NX94 342 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 RRN3Q9NYV6 651 aa12.2□□□□□ -0.46
PRKCB-207ENST00000486868 TCRBV7S2A1N4TA0A589 114 aa12.19□□□□□ -0.46
PRKCB-207ENST00000486868 TULP2O00295 520 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms