RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CLASP2O75122 1294 aaKnown RBP13.53□□□□□ -0.24
HDAC6-229ENST00000486665 BEST1O76090 585 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 SEC24AO95486 1093 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 SPATA31D3P0C874 917 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 TNFAIP3P21580 790 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 BDNFP23560 247 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 KLRC2P26717 231 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 CDK17Q00537 523 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 CREMQ03060 361 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 DUSP4Q13115 394 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 MAPRE1Q15691 268 aaKnown RBP13.53□□□□□ -0.24
HDAC6-229ENST00000486665 NFE2Q16621 373 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-229ENST00000486665 ASTE1Q2TB18 679 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-229ENST00000486665 PKDCCQ504Y2 493 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 IER5LQ5T953 404 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 LILRA6Q6PI73 481 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 SPATA31D4Q6ZUB0 917 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 FAM35AQ86V20 835 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 ZNF677Q86XU0 584 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 SPATA2LQ8IUW3 424 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-229ENST00000486665 PASD1Q8IV76 773 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 TTC9BQ8N6N2 239 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 ANKRD52Q8NB46 1076 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 PRSS33Q8NF86 280 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 SLC30A5Q8TAD4 765 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 ZNF461Q8TAF7 563 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 EDAQ92838 391 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 NHEJ1Q9H9Q4 299 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-229ENST00000486665 ABI2Q9NYB9 513 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-229ENST00000486665 AFF4Q9UHB7 1163 aaKnown RBP13.53□□□□□ -0.24
HDAC6-229ENST00000486665 PCDHGC3Q9UN70 934 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 USP15Q9Y4E8 981 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-229ENST00000486665 PCDHB5Q9Y5E4 795 aa13.53□□□□□ -0.24
HDAC6-229ENST00000486665 BZW2Q9Y6E2 419 aaKnown RBP13.53□□□□□ -0.24
HDAC6-229ENST00000486665 DMDP11532 3685 aa13.52□□□□□ -0.24
HDAC6-229ENST00000486665 ZDBF2Q9HCK1 2354 aa13.52□□□□□ -0.24
HDAC6-229ENST00000486665 MYO15AQ9UKN7 3530 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 TULP2O00295 520 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 TGM5O43548 720 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 AP1G2O75843 785 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 SOAT2O75908 522 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 ADCY1Q08828 1119 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 MAPK8IP2Q13387 824 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-229ENST00000486665 STILQ15468 1287 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 TDRD12Q587J7 1177 aaKnown RBP13.52□□□□□ -0.25
HDAC6-229ENST00000486665 TPGS2Q68CL5 300 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 C4orf50Q6ZRC1 276 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 LRRC8AQ8IWT6 810 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 ZMIZ2Q8NF64 920 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 SLC22A17Q8WUG5 538 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 ZNF830Q96NB3 372 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-229ENST00000486665 KCNK16Q96T55 309 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 SMOQ99835 787 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 BAG1Q99933 345 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-229ENST00000486665 DUSP16Q9BY84 665 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 PDCL3Q9H2J4 239 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 CYTH4Q9UIA0 394 aa13.52□□□□□ -0.25
HDAC6-229ENST00000486665 A0A087X0T9 212 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 SSU72P8A0A1W2PR75 194 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 SOWAHDA6NJG2 315 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 M0QYV0 167 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 CYP1A1P04798 512 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-229ENST00000486665 PTMAP06454 111 aaKnown RBP13.51□□□□□ -0.25
HDAC6-229ENST00000486665 ADH1AP07327 375 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 FAM228BP0C875 321 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 FAM200BP0CF97 657 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 HAPLN1P10915 354 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-229ENST00000486665 ATF2P15336 505 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 GPD2P43304 727 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 GPR15P49685 360 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 CLCN4P51793 760 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 MAP3K7CLP57077 242 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 PDE4CQ08493 712 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 SMARCB1Q12824 385 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 CBX2Q14781 532 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-229ENST00000486665 MTF1Q14872 753 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 CLEC16AQ2KHT3 1053 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 CFAP221Q4G0U5 840 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 CYP26C1Q6V0L0 522 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 RAD9BQ6WBX8 426 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 CLEC20AQ6ZU45 233 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 DNAAF5Q86Y56 855 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 TMTC1Q8IUR5 882 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 SPPL2BQ8TCT7 592 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 C2orf15Q8WU43 125 aaKnown RBP13.51□□□□□ -0.25
HDAC6-229ENST00000486665 CPA5Q8WXQ8 436 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 SECISBP2LQ93073 1101 aaKnown RBP13.51□□□□□ -0.25
HDAC6-229ENST00000486665 FUBP3Q96I24 572 aaKnown RBP eCLIP13.51□□□□□ -0.25
HDAC6-229ENST00000486665 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.51□□□□□ -0.25
HDAC6-229ENST00000486665 LHX5Q9H2C1 402 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 TLE6Q9H808 572 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 CYP4F11Q9HBI6 524 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 KRT82Q9NSB4 513 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 SEPT11Q9NVA2 429 aaKnown RBP13.51□□□□□ -0.25
HDAC6-229ENST00000486665 TAS2R14Q9NYV8 317 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 HESX1Q9UBX0 185 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 ADAMTS1Q9UHI8 967 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 CDH22Q9UJ99 828 aa13.51□□□□□ -0.25
HDAC6-229ENST00000486665 TMEM221A6NGB7 291 aa13.5□□□□□ -0.25
HDAC6-229ENST00000486665 M0R296 226 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms