RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 MON1BQ7L1V2 547 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 LRRC43Q8N309 656 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 EFCAB3Q8N7B9 438 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 POU5F2Q8N7G0 328 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 RIN3Q8TB24 985 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 TAS1R2Q8TE23 839 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 E2F7Q96AV8 911 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 NT5C1BQ96P26 610 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 SRPK1Q96SB4 655 aaKnown RBP11.11□□□□□ -0.63
CCDC171-208ENST00000486641 SETDB2Q96T68 719 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 SLX1AQ9BQ83 275 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 WDR18Q9BV38 432 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 TMEM206Q9H813 350 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 PCDH9Q9HC56 1237 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 PCDH18Q9HCL0 1135 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 TUBGCP4Q9UGJ1 667 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 DMTF1Q9Y222 760 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 INPP5FQ9Y2H2 1132 aa11.11□□□□□ -0.63
CCDC171-208ENST00000486641 MYOCOSA0A1B0GUC4 107 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 SDR42E2A6NKP2 422 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 H3BNX3 289 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 H3BSA7 217 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 IPO5O00410 1097 aaKnown RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 CASQ2O14958 399 aaPredicted RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 PEX1O43933 1283 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 DNAJA2O60884 412 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 ZNF189O75820 626 aaPredicted RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 PSMD10O75832 226 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 CFHP08603 1231 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 CYP3A4P08684 503 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 EIF4BP23588 611 aaKnown RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 YY1P25490 414 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 SSTR3P32745 418 aaPredicted RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 NSFP46459 744 aaKnown RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 GPSM2P81274 684 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 GK3PQ14409 553 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 CHI3L2Q15782 390 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 HSP90AA5PQ58FG0 334 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 CC2D2BQ6DHV5 1058 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 PGM2L1Q6PCE3 622 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 CBWD2Q8IUF1 395 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 IGDCC3Q8IVU1 814 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 C12orf56Q8IXR9 622 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 PPIL6Q8IXY8 311 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 NAT8LQ8N9F0 302 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 PRPF31Q8WWY3 499 aaKnown RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 JDP2Q8WYK2 163 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 POMGNT1Q8WZA1 660 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 SLC35B4Q969S0 331 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 CCDC124Q96CT7 223 aaKnown RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 ACCSQ96QU6 501 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 C11orf70Q9BRQ4 267 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 PI4K2AQ9BTU6 479 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 TOPORSQ9NS56 1045 aaPredicted RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 RAB20Q9NX57 234 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 ZNF711Q9Y462 761 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 MAD1L1Q9Y6D9 718 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 KDM4FA0A1W2PPD8 638 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 E7ESA3 106 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 CYB561D2O14569 222 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 COPEO14579 308 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 TLR3O15455 904 aaKnown RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 TRMUO75648 421 aaKnown RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 FAM155BO75949 473 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 FOSP01100 380 aaPredicted RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 OATP04181 439 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 ITGAVP06756 1048 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 CD48P09326 243 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 AOC1P19801 751 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 DSG3P32926 999 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 ALDH1A3P47895 512 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 GDF10P55107 478 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 COG7P83436 770 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 BTKQ06187 659 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 PPIDQ08752 370 aaKnown RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 KBTBD12Q3ZCT8 623 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 RABGAP1LQ5R372 815 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 OGFRL1Q5TC84 451 aaPredicted RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 PCGF5Q86SE9 256 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 ACSF2Q96CM8 615 aaPredicted RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 TRIM11Q96F44 468 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 MAML3Q96JK9 1138 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 MRPS26Q9BYN8 205 aaKnown RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 BTG4Q9NY30 223 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 KCND2Q9NZV8 630 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 SAE1Q9UBE0 346 aaPredicted RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 APPL1Q9UKG1 709 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 PAIP2BQ9ULR5 123 aaKnown RBP11.1□□□□□ -0.63
CCDC171-208ENST00000486641 POMPQ9Y244 141 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 SSX2IPQ9Y2D8 614 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 COQ4Q9Y3A0 265 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 DTNAQ9Y4J8 743 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 IKBKGQ9Y6K9 419 aa11.1□□□□□ -0.63
CCDC171-208ENST00000486641 ARHGEF35A5YM69 484 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 BOLA2-SMG1P6H3BVE0 249 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 PROCP04070 461 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 KRT1P04264 644 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 SHMT1P34896 483 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 CD97P48960 835 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms