RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 POLIQ9UNA4 740 aa7.39□□□□□ -1.23
HDAC3-209ENST00000486618 ATP8A1Q9Y2Q0 1164 aa7.39□□□□□ -1.23
HDAC3-209ENST00000486618 GIT1Q9Y2X7 761 aa7.39□□□□□ -1.23
HDAC3-209ENST00000486618 MTF2Q9Y483 593 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-209ENST00000486618 IPPQ9Y573 584 aa7.39□□□□□ -1.23
HDAC3-209ENST00000486618 SDK1Q7Z5N4 2213 aa7.39□□□□□ -1.23
HDAC3-209ENST00000486618 FRYLO94915 3013 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 BAHCC1Q9P281 2608 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 USP24Q9UPU5 2620 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 SF3B1O75533 1304 aaKnown RBP eCLIP7.38□□□□□ -1.23
HDAC3-209ENST00000486618 TMEM150BA6NC51 233 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 ALG1L2C9J202 215 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 MAN2B1O00754 1011 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 SMNDC1O75940 238 aaKnown RBP eCLIP7.38□□□□□ -1.23
HDAC3-209ENST00000486618 KIF20AO95235 890 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 SCGB1D2O95969 90 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 RPLP1P05386 114 aaKnown RBP7.38□□□□□ -1.23
HDAC3-209ENST00000486618 C8AP07357 584 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 RETP07949 1114 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 CD72P21854 359 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 TGM1P22735 817 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 MLH1P40692 756 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 QARSP47897 775 aaKnown RBP7.38□□□□□ -1.23
HDAC3-209ENST00000486618 CDKN1CP49918 316 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-209ENST00000486618 SCNN1GP51170 649 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 ADCY1Q08828 1119 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 DMWDQ09019 674 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 LAMTOR4Q0VGL1 99 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 SLMAPQ14BN4 828 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 Q4G0T1 1027 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 XKR5Q6UX68 686 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 ANO5Q75V66 913 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 RTL10Q7L3V2 364 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 MAP4K3Q8IVH8 894 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 RNF149Q8NC42 400 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 CEP170P1Q96L14 293 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 B3GALT6Q96L58 329 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 KXD1Q9BQD3 176 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 MINDY3Q9H8M7 445 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 ANO2Q9NQ90 1003 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 PRMT8Q9NR22 394 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-209ENST00000486618 MIOSQ9NXC5 875 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 CNTN3Q9P232 1028 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 KCNH3Q9ULD8 1083 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 DAAM1Q9Y4D1 1078 aa7.38□□□□□ -1.23
HDAC3-209ENST00000486618 ZMYM2Q9UBW7 1377 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 DNAH14Q0VDD8 3507 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-209ENST00000486618 A6NHS1 94 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 SMTNL1A8MU46 457 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 INO80B-WBP1J3KQ70 363 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 ADAMTS3O15072 1205 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 CCL16O15467 120 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 ECI2O75521 394 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 POU2F2P09086 479 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 PCSK2P16519 638 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 MZF1P28698 734 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-209ENST00000486618 NPEPPSP55786 919 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 NLRP5P59047 1200 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 NTHL1P78549 312 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 ELAVL2Q12926 359 aaKnown RBP7.37□□□□□ -1.23
HDAC3-209ENST00000486618 GRIK3Q13003 919 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 MTAPQ13126 283 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 ZNF211Q13398 564 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-209ENST00000486618 BIRC3Q13489 604 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 TFDP1Q14186 410 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 KRT32Q14532 448 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 MXD4Q14582 209 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-209ENST00000486618 SEPT7Q16181 437 aaKnown RBP7.37□□□□□ -1.23
HDAC3-209ENST00000486618 TTC31Q49AM3 519 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-209ENST00000486618 PABPC1LQ4VXU2 614 aaKnown RBP7.37□□□□□ -1.23
HDAC3-209ENST00000486618 PLA2G4FQ68DD2 849 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 TSSK4Q6SA08 328 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 MOXD1Q6UVY6 613 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 PRSS55Q6UWB4 352 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-209ENST00000486618 B3GNT9Q6UX72 402 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 PRR23BQ6ZRT6 265 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 OR8H2Q8N162 312 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 TEX9Q8N6V9 391 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 ARL10Q8N8L6 244 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 TBCKQ8TEA7 893 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 GIMAP1Q8WWP7 306 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 DNASE1L2Q92874 299 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 GJA10Q969M2 543 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 TMEM143Q96AN5 459 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 MEGF10Q96KG7 1140 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 TCEANC2Q96MN5 208 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 TTPALQ9BTX7 342 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 APOL6Q9BWW8 343 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 EIF2AQ9BY44 585 aaKnown RBP7.37□□□□□ -1.23
HDAC3-209ENST00000486618 RNF26Q9BY78 433 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-209ENST00000486618 LACRTQ9GZZ8 138 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 MRPL18Q9H0U6 180 aaKnown RBP7.37□□□□□ -1.23
HDAC3-209ENST00000486618 DHX33Q9H6R0 707 aaKnown RBP7.37□□□□□ -1.23
HDAC3-209ENST00000486618 PARD6AQ9NPB6 346 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 GDE1Q9NZC3 331 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 ANGPTL2Q9UKU9 493 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 HES2Q9Y543 173 aa7.37□□□□□ -1.23
HDAC3-209ENST00000486618 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.37□□□□□ -1.23
HDAC3-209ENST00000486618 NOTCH4Q99466 2003 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms