RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 PPP2R3CQ969Q6 453 aa6.48□□□□□ -1.37
LTN1-206ENST00000486427 SPSB4Q96A44 273 aa6.48□□□□□ -1.37
LTN1-206ENST00000486427 ZNF287Q9HBT7 754 aa6.48□□□□□ -1.37
LTN1-206ENST00000486427 OGDHLQ9ULD0 1010 aa6.48□□□□□ -1.37
LTN1-206ENST00000486427 SH2B3Q9UQQ2 575 aa6.48□□□□□ -1.37
LTN1-206ENST00000486427 MASP2O00187 686 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 ZNF213O14771 459 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 MGEA5O60502 916 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 RBMXL2O75526 392 aaKnown RBP6.47□□□□□ -1.37
LTN1-206ENST00000486427 ONECUT2O95948 504 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 C1RP00736 705 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 HNRNPCP07910 306 aaKnown RBP eCLIP6.47□□□□□ -1.37
LTN1-206ENST00000486427 IL1R1P14778 569 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 KLRC1P26715 233 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 PRKAG1P54619 331 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 SOX10P56693 466 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 KCTD20Q7Z5Y7 419 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 SOCS4Q8WXH5 440 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 PUS7Q96PZ0 661 aaKnown RBP6.47□□□□□ -1.37
LTN1-206ENST00000486427 APOL5Q9BWW9 433 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 STK31Q9BXU1 1019 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 GBA2Q9HCG7 927 aaPredicted RBP6.47□□□□□ -1.37
LTN1-206ENST00000486427 XPNPEP3Q9NQH7 507 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 DUSP22Q9NRW4 184 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 ZSCAN32Q9NX65 697 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 SERGEFQ9UGK8 458 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 PAXBP1Q9Y5B6 917 aa6.47□□□□□ -1.37
LTN1-206ENST00000486427 H7C4K7 107 aa6.46□□□□□ -1.38
LTN1-206ENST00000486427 FAM163BP0C2L3 166 aa6.46□□□□□ -1.38
LTN1-206ENST00000486427 ENGP17813 658 aa6.46□□□□□ -1.38
LTN1-206ENST00000486427 PDE1AP54750 535 aa6.46□□□□□ -1.38
LTN1-206ENST00000486427 C21orf58P58505 322 aa6.46□□□□□ -1.38
LTN1-206ENST00000486427 SLC9A4Q6AI14 798 aa6.46□□□□□ -1.38
LTN1-206ENST00000486427 ANKRD16Q6P6B7 361 aa6.46□□□□□ -1.38
LTN1-206ENST00000486427 SYCE2Q6PIF2 218 aa6.46□□□□□ -1.38
LTN1-206ENST00000486427 ZNF788Q6ZQV5 615 aa6.46□□□□□ -1.38
LTN1-206ENST00000486427 IZUMO1Q8IYV9 350 aa6.46□□□□□ -1.38
LTN1-206ENST00000486427 LRRC71Q8N4P6 559 aa6.46□□□□□ -1.38
LTN1-206ENST00000486427 DNAJB14Q8TBM8 379 aa6.46□□□□□ -1.38
LTN1-206ENST00000486427 XAGE5Q8WWM1 108 aa6.46□□□□□ -1.38
LTN1-206ENST00000486427 DNMT3BQ9UBC3 853 aaKnown RBP6.46□□□□□ -1.38
LTN1-206ENST00000486427 CDY1Q9Y6F8 540 aa6.46□□□□□ -1.38
LTN1-206ENST00000486427 WNT6Q9Y6F9 365 aa6.46□□□□□ -1.38
LTN1-206ENST00000486427 AOX1Q06278 1338 aa6.46□□□□□ -1.38
LTN1-206ENST00000486427 F8W8V4 182 aa6.45□□□□□ -1.38
LTN1-206ENST00000486427 RASSF9O75901 435 aa6.45□□□□□ -1.38
LTN1-206ENST00000486427 ZNF37AP17032 561 aaPredicted RBP6.45□□□□□ -1.38
LTN1-206ENST00000486427 EEFSECP57772 596 aaKnown RBP6.45□□□□□ -1.38
LTN1-206ENST00000486427 WDR53Q7Z5U6 358 aaPredicted RBP6.45□□□□□ -1.38
LTN1-206ENST00000486427 REPS1Q96D71 796 aa6.45□□□□□ -1.38
LTN1-206ENST00000486427 PPP1R9BQ96SB3 815 aa6.45□□□□□ -1.38
LTN1-206ENST00000486427 C17orf80Q9BSJ5 609 aa6.45□□□□□ -1.38
LTN1-206ENST00000486427 DDX21Q9NR30 783 aaKnown RBP eCLIP6.45□□□□□ -1.38
LTN1-206ENST00000486427 PADI4Q9UM07 663 aa6.45□□□□□ -1.38
LTN1-206ENST00000486427 LOC102723971A0A1B0GUV8 181 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 WIPF3A6NGB9 483 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 QSOX1O00391 747 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 CD38P28907 300 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 CTGFP29279 349 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 NPY5RQ15761 445 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 CCDC142Q17RM4 750 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 AARS2Q5JTZ9 985 aaKnown RBP6.44□□□□□ -1.38
LTN1-206ENST00000486427 COLEC12Q5KU26 742 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 CACHD1Q5VU97 1274 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 FCRLBQ6BAA4 426 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 DPY19L3Q6ZPD9 716 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 Q6ZWC4 215 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 PARS2Q7L3T8 475 aaKnown RBP6.44□□□□□ -1.38
LTN1-206ENST00000486427 CAND1Q86VP6 1230 aaKnown RBP6.44□□□□□ -1.38
LTN1-206ENST00000486427 MSLNLQ96KJ4 702 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 MACROD1Q9BQ69 325 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 FSD1LQ9BXM9 530 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 CHST8Q9H2A9 424 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 TRMT13Q9NUP7 481 aaKnown RBP6.44□□□□□ -1.38
LTN1-206ENST00000486427 MID2Q9UJV3 735 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 GABRQQ9UN88 632 aa6.44□□□□□ -1.38
LTN1-206ENST00000486427 MANSC4A6NHS7 340 aaPredicted RBP6.43□□□□□ -1.38
LTN1-206ENST00000486427 RRP9O43818 475 aaKnown RBP6.43□□□□□ -1.38
LTN1-206ENST00000486427 SRGAP2O75044 1071 aa6.43□□□□□ -1.38
LTN1-206ENST00000486427 TXNP10599 105 aaKnown RBP6.43□□□□□ -1.38
LTN1-206ENST00000486427 PTDSS1P48651 473 aaKnown RBP6.43□□□□□ -1.38
LTN1-206ENST00000486427 ITGA8P53708 1063 aa6.43□□□□□ -1.38
LTN1-206ENST00000486427 CYP4F2P78329 520 aa6.43□□□□□ -1.38
LTN1-206ENST00000486427 TFF2Q03403 129 aa6.43□□□□□ -1.38
LTN1-206ENST00000486427 CYP1B1Q16678 543 aa6.43□□□□□ -1.38
LTN1-206ENST00000486427 PCID2Q5JVF3 399 aa6.43□□□□□ -1.38
LTN1-206ENST00000486427 CERCAMQ5T4B2 595 aa6.43□□□□□ -1.38
LTN1-206ENST00000486427 FCRL6Q6DN72 434 aa6.43□□□□□ -1.38
LTN1-206ENST00000486427 CEP85Q6P2H3 762 aa6.43□□□□□ -1.38
LTN1-206ENST00000486427 UNC13DQ70J99 1090 aa6.43□□□□□ -1.38
LTN1-206ENST00000486427 SPARTQ8N0X7 666 aa6.43□□□□□ -1.38
LTN1-206ENST00000486427 RP9Q8TA86 221 aaKnown RBP6.43□□□□□ -1.38
LTN1-206ENST00000486427 TBC1D5Q92609 795 aa6.43□□□□□ -1.38
LTN1-206ENST00000486427 C8orf48Q96LL4 319 aa6.43□□□□□ -1.38
LTN1-206ENST00000486427 HDAC9Q9UKV0 1011 aa6.43□□□□□ -1.38
LTN1-206ENST00000486427 ADAMTS5Q9UNA0 930 aa6.43□□□□□ -1.38
LTN1-206ENST00000486427 TARM1B6A8C7 271 aa6.42□□□□□ -1.38
LTN1-206ENST00000486427 RAB27BO00194 218 aa6.42□□□□□ -1.38
LTN1-206ENST00000486427 CCP110O43303 1012 aa6.42□□□□□ -1.38
LTN1-206ENST00000486427 TJP3O95049 919 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms