RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 GNRH1P01148 92 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 KDELR1P24390 212 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 MIPP30301 263 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 RPL9P32969 192 aaKnown RBP12.56□□□□□ -0.4
PKP4-213ENST00000486254 GNL1P36915 607 aaPredicted RBP12.56□□□□□ -0.4
PKP4-213ENST00000486254 LILRA4P59901 499 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 SLC6A3Q01959 620 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 CACNB2Q08289 660 aaPredicted RBP12.56□□□□□ -0.4
PKP4-213ENST00000486254 ORC1Q13415 861 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 PDK2Q15119 407 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 BOLA3Q53S33 107 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 DAB2IPQ5VWQ8 1189 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 CXCL17Q6UXB2 119 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 FAM183BPQ6ZVS7 135 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 ANKS1BQ7Z6G8 1248 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 ACOT1Q86TX2 421 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 ADGRF2Q8IZF7 708 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 OR6B3Q8NGW1 331 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 RNF25Q96BH1 459 aaPredicted RBP12.56□□□□□ -0.4
PKP4-213ENST00000486254 PGM2Q96G03 612 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 HNRNPABQ99729 332 aaKnown RBP12.56□□□□□ -0.4
PKP4-213ENST00000486254 HEMGNQ9BXL5 484 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 CXCL16Q9H2A7 254 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 SNX25Q9H3E2 840 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 PRDM16Q9HAZ2 1276 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 PCDH9Q9HC56 1237 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 XPNPEP3Q9NQH7 507 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 GABRQQ9UN88 632 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 ATP8A1Q9Y2Q0 1164 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 PTPN22Q9Y2R2 807 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 NME7Q9Y5B8 376 aa12.56□□□□□ -0.4
PKP4-213ENST00000486254 APOC4-APOC2K7ER74 178 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 SPTLC1O15269 473 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 INPPL1O15357 1258 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 APOC2P02655 101 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 SKIP12755 728 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 IL1R2P27930 398 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 ARSEP51690 589 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 PRKCZQ05513 592 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 SOX4Q06945 474 aaPredicted RBP12.55□□□□□ -0.4
PKP4-213ENST00000486254 PTK7Q13308 1070 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 PMF1Q6P1K2 205 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 TMEM130Q8N3G9 435 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 ARRDC4Q8NCT1 418 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 UBA3Q8TBC4 463 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 CCDC114Q96M63 670 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 C11orf84Q9BUA3 381 aaPredicted RBP12.55□□□□□ -0.4
PKP4-213ENST00000486254 ROPN1BQ9BZX4 212 aaPredicted RBP12.55□□□□□ -0.4
PKP4-213ENST00000486254 ROPN1Q9HAT0 212 aaPredicted RBP12.55□□□□□ -0.4
PKP4-213ENST00000486254 PRDM10Q9NQV6 1147 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 ST3GAL5Q9UNP4 418 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 SHOC2Q9UQ13 582 aa12.55□□□□□ -0.4
PKP4-213ENST00000486254 XPO1O14980 1071 aaKnown RBP12.54□□□□□ -0.4
PKP4-213ENST00000486254 PAPSS1O43252 624 aaPredicted RBP12.54□□□□□ -0.4
PKP4-213ENST00000486254 TCEA3O75764 348 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 TOMM70O94826 608 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 PGK1P00558 417 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 CHRNA1P02708 482 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 PDGFRAP16234 1089 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 NR1D1P20393 614 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 HOXD10P28358 340 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 SDC4P31431 198 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 GJC1P36383 396 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 LMAN1P49257 510 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 SP3Q02447 781 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 ADCY2Q08462 1091 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 PDE4CQ08493 712 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 CBLBQ13191 982 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 TFDP2Q14188 446 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 DSC3Q14574 896 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 MORF4L2Q15014 288 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 ATP13A4Q4VNC1 1196 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 FAM47CQ5HY64 1035 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 TXNRD3NBQ6F5E7 133 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 OR6B2Q6IFH4 312 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 MFSD5Q6N075 450 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 HIBCHQ6NVY1 386 aaPredicted RBP12.54□□□□□ -0.4
PKP4-213ENST00000486254 CYP4V2Q6ZWL3 525 aaPredicted RBP12.54□□□□□ -0.4
PKP4-213ENST00000486254 PSTKQ8IV42 348 aaKnown RBP12.54□□□□□ -0.4
PKP4-213ENST00000486254 MAP7D3Q8IWC1 876 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 EMC1Q8N766 993 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 C12orf29Q8N999 325 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 B3GALNT2Q8NCR0 500 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 GSTCDQ8NEC7 633 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 RXFP2Q8WXD0 754 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 KCTD13Q8WZ19 329 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 CENPIQ92674 756 aaPredicted RBP12.54□□□□□ -0.4
PKP4-213ENST00000486254 APOL6Q9BWW8 343 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 ARHGAP39Q9C0H5 1083 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 STMN4Q9H169 189 aaPredicted RBP12.54□□□□□ -0.4
PKP4-213ENST00000486254 UBN1Q9NPG3 1134 aa12.54□□□□□ -0.4
PKP4-213ENST00000486254 KIF3CO14782 793 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 RIPK2O43353 540 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 PRPSAP2O60256 369 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 THP07101 528 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 ASGR1P07306 291 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 ABHD2P08910 425 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 CAPN2P17655 700 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 RDXP35241 583 aaKnown RBP12.53□□□□□ -0.4
PKP4-213ENST00000486254 ACTN2P35609 894 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms