RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-213	ENST00000486116	TNFRSF4	P43489	277 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	CCT2	P78371	535 aa	Known RBP	10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	KCNH2	Q12809	1159 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	ZBTB6	Q15916	424 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	EARS2	Q5JPH6	523 aa	Known RBP	10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	RNF20	Q5VTR2	975 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	MPZL3	Q6UWV2	235 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	PIK3AP1	Q6ZUJ8	805 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	MIB1	Q86YT6	1006 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	SPPL2B	Q8TCT7	592 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	OXER1	Q8TDS5	423 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	C2orf15	Q8WU43	125 aa	Known RBP	10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	DNASE2B	Q8WZ79	361 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	FGF11	Q92914	225 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	ERLEC1	Q96DZ1	483 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	TMEM176A	Q96HP8	235 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	ZBTB45	Q96K62	511 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	SENP8	Q96LD8	212 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	SLC6A17	Q9H1V8	727 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	CPNE5	Q9HCH3	593 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	ARHGEF4	Q9NR80	690 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	ABI2	Q9NYB9	513 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	PCDHA12	Q9UN75	941 aa		10.44	□□□□□ -0.74
PTPN7-213	ENST00000486116	BSN	Q9UPA5	3926 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	BTBD18	B2RXH4	712 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	TRIM66	O15016	1216 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	NDUFS2	O75306	463 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	MED24	O75448	989 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	NOL4	O94818	638 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	CYP11A1	P05108	521 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	CSH1	P0DML2	217 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	CSH2	P0DML3	217 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	CXCL8	P10145	99 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	GRIA2	P42262	883 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	LILRA4	P59901	499 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	REST	Q13127	1097 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	DHCR24	Q15392	516 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	TSGA10IP	Q3SY00	556 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	PRICKLE2	Q7Z3G6	844 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	FILIP1	Q7Z7B0	1213 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	ERICH1	Q86X53	443 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	CATSPER3	Q86XQ3	398 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	ADGRG2	Q8IZP9	1017 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	ZNF513	Q8N8E2	541 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	FOXJ1	Q92949	421 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	TRMT2B	Q96GJ1	504 aa	Known RBP	10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	IFT74	Q96LB3	600 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	NAP1L4	Q99733	375 aa	Known RBP	10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	MRPL4	Q9BYD3	311 aa	Known RBP	10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	NRSN2	Q9GZP1	204 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	TTC12	Q9H892	705 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	TMLHE	Q9NVH6	421 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	ARHGAP26	Q9UNA1	814 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	AHCTF1	Q8WYP5	2266 aa		10.43	□□□□□ -0.74
PTPN7-213	ENST00000486116	BOD1L1	Q8NFC6	3051 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	NOTCH2	Q04721	2471 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	MEI4	A8MW99	385 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	LEFTY2	O00292	366 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	SCAMP3	O14828	347 aa	Known RBP	10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	BRINP1	O60477	761 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	DEXI	O95424	95 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	JUP	P14923	745 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	CYP3A5	P20815	502 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	ADSS	P30520	456 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	HNF1B	P35680	557 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	TNFSF9	P41273	254 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	ATP2C1	P98194	919 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	SSRP1	Q08945	709 aa	Known RBP	10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	TARDBP	Q13148	414 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	SAFB	Q15424	915 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	ARHGAP40	Q5TG30	622 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	RHBDF2	Q6PJF5	856 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	IL27RA	Q6UWB1	636 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	TRIM22	Q8IYM9	498 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	IPO4	Q8TEX9	1081 aa	Known RBP	10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	MED8	Q96G25	268 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	MYRFL	Q96LU7	910 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	TCHP	Q9BT92	498 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	MIR1-1HG	Q9H1L0	117 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	ANKMY1	Q9P2S6	941 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	UXT	Q9UBK9	157 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	UBQLN1	Q9UMX0	589 aa	Known RBP	10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	NFE2L3	Q9Y4A8	694 aa		10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	USP9Y	O00507	2555 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN7-213	ENST00000486116	DOPEY1	Q5JWR5	2465 aa		10.41	□□□□□ -0.74
PTPN7-213	ENST00000486116	PLXNA2	O75051	1894 aa		10.41	□□□□□ -0.74
PTPN7-213	ENST00000486116		A0A1B0GVT2	93 aa		10.41	□□□□□ -0.74
PTPN7-213	ENST00000486116	TTC26	A0AVF1	554 aa		10.41	□□□□□ -0.74
PTPN7-213	ENST00000486116	ARHGEF35	A5YM69	484 aa		10.41	□□□□□ -0.74
PTPN7-213	ENST00000486116	BCAT2	O15382	392 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN7-213	ENST00000486116	NCAM1	P13591	858 aa		10.41	□□□□□ -0.74
PTPN7-213	ENST00000486116	HDC	P19113	662 aa		10.41	□□□□□ -0.74
PTPN7-213	ENST00000486116	PDIA3	P30101	505 aa	Known RBP	10.41	□□□□□ -0.74
PTPN7-213	ENST00000486116	TXK	P42681	527 aa		10.41	□□□□□ -0.74
PTPN7-213	ENST00000486116	GRK6	P43250	576 aa		10.41	□□□□□ -0.74
PTPN7-213	ENST00000486116	TMPRSS3	P57727	454 aa		10.41	□□□□□ -0.74
PTPN7-213	ENST00000486116	KCNB1	Q14721	858 aa		10.41	□□□□□ -0.74
PTPN7-213	ENST00000486116	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
PTPN7-213	ENST00000486116	NUMA1	Q14980	2115 aa		10.41	□□□□□ -0.74
PTPN7-213	ENST00000486116	SUZ12	Q15022	739 aa	Known RBP	10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms