RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 LUC7L2Q9Y383 392 aaKnown RBP18.12■□□□□ 0.49
VIM-205ENST00000485947 STK25O00506 426 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 C4BPAP04003 597 aaKnown RBP18.11■□□□□ 0.49
VIM-205ENST00000485947 PSMC3P17980 439 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 SLC9A1P19634 815 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 ATICP31939 592 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 MAGEA9P43362 315 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 RPL10AP62906 217 aaKnown RBP18.11■□□□□ 0.49
VIM-205ENST00000485947 ARID5BQ14865 1188 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 MLF2Q15773 248 aaPredicted RBP18.11■□□□□ 0.49
VIM-205ENST00000485947 TAF12Q16514 161 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 CFAP221Q4G0U5 840 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 SLC44A4Q53GD3 710 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 INTS6LQ5JSJ4 861 aaKnown RBP18.11■□□□□ 0.49
VIM-205ENST00000485947 TANGO2Q6ICL3 276 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 LRRTM3Q86VH5 581 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 ADGRF2Q8IZF7 708 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 TC2NQ8N9U0 490 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 OR5B17Q8NGF7 314 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 LMO3Q8TAP4 145 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 SHKBP1Q8TBC3 707 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 PANX2Q96RD6 677 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 SEPT5Q99719 369 aaPredicted RBP18.11■□□□□ 0.49
VIM-205ENST00000485947 TRMT61BQ9BVS5 477 aaKnown RBP18.11■□□□□ 0.49
VIM-205ENST00000485947 NUCKS1Q9H1E3 243 aaKnown RBP18.11■□□□□ 0.49
VIM-205ENST00000485947 GANQ9H2C0 597 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 SIT1Q9Y3P8 196 aa18.11■□□□□ 0.49
VIM-205ENST00000485947 PTPRJQ12913 1337 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 KANSL1LA0AUZ9 987 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 CSH1P0DML2 217 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 CSH2P0DML3 217 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 GLULP15104 373 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 FCARP24071 287 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 DDX6P26196 483 aaKnown RBP eCLIP18.1■□□□□ 0.49
VIM-205ENST00000485947 KRT9P35527 623 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 SOWAHAQ2M3V2 549 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 KLHDC7AQ5VTJ3 777 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 DPY19L2P1Q6NXN4 242 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 C1orf228Q6PIY5 440 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 MFSD6LQ8IWD5 586 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 LRRC8AQ8IWT6 810 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 CCDC112Q8NEF3 446 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 ZSCAN18Q8TBC5 510 aaPredicted RBP18.1■□□□□ 0.49
VIM-205ENST00000485947 CPLX3Q8WVH0 158 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 ZNF516Q92618 1163 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 FAM81BQ96LP2 452 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 GCNAQ96QF7 691 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 SIX2Q9NPC8 291 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 FAM86C1Q9NVL1 165 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 RAB20Q9NX57 234 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 CDH9Q9ULB4 789 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 MYO6Q9UM54 1294 aa18.1■□□□□ 0.49
VIM-205ENST00000485947 MRPS17Q9Y2R5 130 aaKnown RBP18.1■□□□□ 0.49
VIM-205ENST00000485947 TSC2P49815 1807 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 TULP1O00294 542 aaPredicted RBP18.09■□□□□ 0.49
VIM-205ENST00000485947 TACC1O75410 805 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 NOL4O94818 638 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 ATF6P18850 670 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 WARSP23381 471 aaKnown RBP18.09■□□□□ 0.49
VIM-205ENST00000485947 BIRC3Q13489 604 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 TEAD2Q15562 447 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 TDRD10Q5VZ19 366 aaKnown RBP18.09■□□□□ 0.49
VIM-205ENST00000485947 LMBRD2Q68DH5 695 aaPredicted RBP18.09■□□□□ 0.49
VIM-205ENST00000485947 FAM171BQ6P995 826 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 C4orf50Q6ZRC1 276 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 CACNA2D4Q7Z3S7 1137 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 DTWD2Q8NBA8 298 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 MSANTD3Q96H12 275 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 DNAJC7Q99615 494 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 PKMYT1Q99640 499 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 SLITRK6Q9H5Y7 841 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 TASP1Q9H6P5 420 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 VRTNQ9H8Y1 702 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 ABI2Q9NYB9 513 aaPredicted RBP18.09■□□□□ 0.49
VIM-205ENST00000485947 UXTQ9UBK9 157 aaPredicted RBP18.09■□□□□ 0.49
VIM-205ENST00000485947 APEX2Q9UBZ4 518 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 DMDP11532 3685 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 VPS13AQ96RL7 3174 aa18.09■□□□□ 0.49
VIM-205ENST00000485947 A0A1W2PRU2 124 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 PROB1E7EW31 1015 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 MAN2B1O00754 1011 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 EPHB6O15197 1021 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 NCAM2O15394 837 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 PI15O43692 258 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 PHACTR2O75167 634 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 HLA-DRAP01903 254 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 UCHL3P15374 230 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 GABRR2P28476 465 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 PIK3CAP42336 1068 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 MAGEA11P43364 429 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 ADKP55263 362 aaKnown RBP18.08■□□□□ 0.48
VIM-205ENST00000485947 POLR2FP61218 127 aaKnown RBP18.08■□□□□ 0.48
VIM-205ENST00000485947 TRPC3Q13507 836 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 TSR1Q2NL82 804 aaKnown RBP18.08■□□□□ 0.48
VIM-205ENST00000485947 POTEHQ6S545 545 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 VSTM1Q6UX27 236 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 GAREM2Q75VX8 874 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 FMNL3Q8IVF7 1028 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 TTC9BQ8N6N2 239 aa18.08■□□□□ 0.48
VIM-205ENST00000485947 PJA1Q8NG27 643 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms