RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 XYLT1Q86Y38 959 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 CREG2Q8IUH2 290 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 ZDHHC17Q8IUH5 632 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 LRRC43Q8N309 656 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 SLC35F5Q8WV83 523 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 LPIN3Q9BQK8 851 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 TMEM175Q9BSA9 504 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 SLC4A5Q9BY07 1137 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 DUSP16Q9BY84 665 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 CARD9Q9H257 536 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 TTYH1Q9H313 450 aaPredicted RBP10.04□□□□□ -0.8
CTSA-208ENST00000485627 NRDE2Q9H7Z3 1164 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 METTL5Q9NRN9 209 aaKnown RBP10.04□□□□□ -0.8
CTSA-208ENST00000485627 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.04□□□□□ -0.8
CTSA-208ENST00000485627 ADAM28Q9UKQ2 775 aa10.04□□□□□ -0.8
CTSA-208ENST00000485627 V9GYY5 206 aaPredicted RBP10.04□□□□□ -0.8
CTSA-208ENST00000485627 MYH10P35580 1976 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 TRIM43BA6NCK2 446 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 PIK3R2O00459 728 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 NRP1O14786 923 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 SYN3O14994 580 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 DDX3YO15523 660 aaKnown RBP10.03□□□□□ -0.8
CTSA-208ENST00000485627 AP1G2O75843 785 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 RNF8O76064 485 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 GJB6O95452 261 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 ITGB1P05556 798 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 LCP1P13796 627 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 CSF2RAP15509 400 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 NPR3P17342 541 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 CTNNA1P35221 906 aaKnown RBP10.03□□□□□ -0.8
CTSA-208ENST00000485627 CETN2P41208 172 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 ALDH7A1P49419 539 aaKnown RBP10.03□□□□□ -0.8
CTSA-208ENST00000485627 GATMP50440 423 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 RNASE9P60153 205 aaKnown RBP10.03□□□□□ -0.8
CTSA-208ENST00000485627 RPL7AP62424 266 aaKnown RBP10.03□□□□□ -0.8
CTSA-208ENST00000485627 SHHQ15465 462 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 HADHQ16836 314 aaKnown RBP10.03□□□□□ -0.8
CTSA-208ENST00000485627 TCTN1Q2MV58 587 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 INTS6LQ5JSJ4 861 aaKnown RBP10.03□□□□□ -0.8
CTSA-208ENST00000485627 C9orf50Q5SZB4 431 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 SPOUT1Q5T280 376 aaKnown RBP10.03□□□□□ -0.8
CTSA-208ENST00000485627 MFSD5Q6N075 450 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 PMF1Q6P1K2 205 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 CD300LGQ6UXG3 332 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.03□□□□□ -0.8
CTSA-208ENST00000485627 C4orf50Q6ZRC1 276 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 FAM183BPQ6ZVS7 135 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 TMEM110Q86TL2 294 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 FAM35AQ86V20 835 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 RHOT1Q8IXI2 618 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 DCP1BQ8IZD4 617 aaKnown RBP10.03□□□□□ -0.8
CTSA-208ENST00000485627 FUKQ8N0W3 1084 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 MYCBPAPQ8TBZ2 947 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 ACTRT1Q8TDG2 376 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 TRIM43Q96BQ3 446 aaPredicted RBP10.03□□□□□ -0.8
CTSA-208ENST00000485627 MCRS1Q96EZ8 462 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 MS4A14Q96JA4 679 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.03□□□□□ -0.85e-10■□□□□ 9.3
CTSA-208ENST00000485627 B3GNT5Q9BYG0 378 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 TRIM7Q9C029 511 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 LRRC4Q9HBW1 653 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 CRTAC1Q9NQ79 661 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 KRT82Q9NSB4 513 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 ASNSD1Q9NWL6 643 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 TJP2Q9UDY2 1190 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 DNAJB4Q9UDY4 337 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 PCDHA3Q9Y5H8 950 aa10.03□□□□□ -0.8
CTSA-208ENST00000485627 SF3B1O75533 1304 aaKnown RBP eCLIP10.03□□□□□ -0.8
CTSA-208ENST00000485627 TDRD15B5MCY1 1934 aaKnown RBP10.02□□□□□ -0.81
CTSA-208ENST00000485627 GOLGA6L10A0A0M3HER8 536 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 TCRBV5S1A1TA0A578 114 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 MYBPHLA2RUH7 354 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 CARNS1A5YM72 827 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 TULP2O00295 520 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 CLDN5O00501 218 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 PSTPIP1O43586 416 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 B4GALT3O60512 393 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 GPD1P21695 349 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 TKTP29401 623 aaKnown RBP10.02□□□□□ -0.81
CTSA-208ENST00000485627 GJC1P36383 396 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 PLA2G4AP47712 749 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 SLC11A1P49279 550 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 MAP3K7CLP57077 242 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 SLC6A3Q01959 620 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 ITIH3Q06033 890 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 ACAP1Q15027 740 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 LONRF2Q1L5Z9 754 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 ERCC6LQ2NKX8 1250 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 PPP1R15BQ5SWA1 713 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 CC2D1AQ6P1N0 951 aaPredicted RBP10.02□□□□□ -0.81
CTSA-208ENST00000485627 ZNF572Q7Z3I7 529 aaPredicted RBP10.02□□□□□ -0.81
CTSA-208ENST00000485627 CEP57Q86XR8 500 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 SPATA2LQ8IUW3 424 aaPredicted RBP10.02□□□□□ -0.81
CTSA-208ENST00000485627 SIX6OS1Q8N1H7 587 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 LRRN4CLQ8ND94 238 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 SPATA4Q8NEY3 305 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 FNIP1Q8TF40 1166 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 CD101Q93033 1021 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 MYLPFQ96A32 169 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 SMARCD1Q96GM5 515 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms