RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 O00370 1275 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 PRRG1O14668 218 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 CCL16O15467 120 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 VDRP11473 427 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 BRD2P25440 801 aaKnown RBP12.97□□□□□ -0.33
TRA2B-213ENST00000485530 ADORA2BP29275 332 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 ELF1P32519 619 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 USP8P40818 1118 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 MAGEA11P43364 429 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 YWHAEP62258 255 aaKnown RBP12.97□□□□□ -0.33
TRA2B-213ENST00000485530 NTHL1P78549 312 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 PLCB2Q00722 1185 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 TWF1Q12792 350 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 MTMR3Q13615 1198 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 MAPRE1Q15691 268 aaKnown RBP12.97□□□□□ -0.33
TRA2B-213ENST00000485530 MGAT5BQ3V5L5 792 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 PKDCCQ504Y2 493 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 PPM1LQ5SGD2 360 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 RARS2Q5T160 578 aaKnown RBP12.97□□□□□ -0.33
TRA2B-213ENST00000485530 E4F1Q66K89 784 aaPredicted RBP12.97□□□□□ -0.33
TRA2B-213ENST00000485530 ARHGAP17Q68EM7 881 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 FAM35AQ86V20 835 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 SLC47A2Q86VL8 602 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 TTC30AQ86WT1 665 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 GIPC2Q8TF65 315 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 C2orf15Q8WU43 125 aaKnown RBP12.97□□□□□ -0.33
TRA2B-213ENST00000485530 ZNF606Q8WXB4 792 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 FUBP3Q96I24 572 aaKnown RBP eCLIP12.97□□□□□ -0.33
TRA2B-213ENST00000485530 SEPT5Q99719 369 aaPredicted RBP12.97□□□□□ -0.33
TRA2B-213ENST00000485530 LRRC3Q9BY71 257 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 PRKD2Q9BZL6 878 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 CSNK1G1Q9HCP0 422 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 DNMT3BQ9UBC3 853 aaKnown RBP12.97□□□□□ -0.33
TRA2B-213ENST00000485530 SORCS3Q9UPU3 1222 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 YIPF1Q9Y548 306 aa12.97□□□□□ -0.33
TRA2B-213ENST00000485530 HHLA1C9JL84 531 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 F8VP50 259 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 TULP2O00295 520 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 GFPT2O94808 682 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 CD19P15391 556 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 HMGA1P17096 107 aaKnown RBP12.96□□□□□ -0.33
TRA2B-213ENST00000485530 HOXB8P17481 243 aaPredicted RBP12.96□□□□□ -0.33
TRA2B-213ENST00000485530 TUFMP49411 452 aaKnown RBP12.96□□□□□ -0.33
TRA2B-213ENST00000485530 ZNF75DP51815 510 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 CNGA2Q16280 664 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 LCLAT1Q6UWP7 414 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 C4orf50Q6ZRC1 276 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 CCDC149Q6ZUS6 474 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 RTL10Q7L3V2 364 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 IRF2BP2Q7Z5L9 587 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 DNAJB7Q7Z6W7 309 aaPredicted RBP12.96□□□□□ -0.33
TRA2B-213ENST00000485530 GPR149Q86SP6 731 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 VSTM4Q8IW00 320 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 SCN4BQ8IWT1 228 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 UBALD2Q8IYN6 164 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 HS6ST3Q8IZP7 471 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 WDTC1Q8N5D0 677 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 CMASQ8NFW8 434 aaPredicted RBP12.96□□□□□ -0.33
TRA2B-213ENST00000485530 UBA3Q8TBC4 463 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 CPLX3Q8WVH0 158 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 DDX1Q92499 740 aaKnown RBP12.96□□□□□ -0.33
TRA2B-213ENST00000485530 FAM81BQ96LP2 452 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 MED10Q9BTT4 135 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 TRIM5Q9C035 493 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 ADAM7Q9H2U9 754 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 SMOC2Q9H3U7 446 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 ZDHHC7Q9NXF8 308 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 KIAA1257Q9ULG3 409 aa12.96□□□□□ -0.33
TRA2B-213ENST00000485530 TNFRSF10BO14763 440 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 AP1G2O75843 785 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 GYPCP04921 128 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 HNRNPA1P09651 372 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRA2B-213ENST00000485530 CHRNB2P17787 502 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 RFX1P22670 979 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 HOXA9P31269 272 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 SOX5P35711 763 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 GRIK1P39086 918 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 MAP3K7CLP57077 242 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 USP46P62068 366 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 SGO2Q562F6 1265 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 FIGNQ5HY92 759 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 LIN9Q5TKA1 542 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 DENND1BQ6P3S1 775 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 VSTM1Q6UX27 236 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 CLEC20AQ6ZU45 233 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 GRASPQ7Z6J2 395 aaPredicted RBP12.95□□□□□ -0.34
TRA2B-213ENST00000485530 NOP9Q86U38 636 aaKnown RBP12.95□□□□□ -0.34
TRA2B-213ENST00000485530 ANKRD52Q8NB46 1076 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 OLIG1Q8TAK6 271 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 C8orf48Q96LL4 319 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 DUSP16Q9BY84 665 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 SFXN1Q9H9B4 322 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 ZNF334Q9HCZ1 680 aaPredicted RBP12.95□□□□□ -0.34
TRA2B-213ENST00000485530 KRT82Q9NSB4 513 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 DZANK1Q9NVP4 752 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 TSPAN16Q9UKR8 245 aa12.95□□□□□ -0.34
TRA2B-213ENST00000485530 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRA2B-213ENST00000485530 MED19A0JLT2 244 aaPredicted RBP12.94□□□□□ -0.34
TRA2B-213ENST00000485530 SLC38A8A6NNN8 435 aa12.94□□□□□ -0.34
TRA2B-213ENST00000485530 CBFA2T2O43439 604 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms