RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 NOL4O94818 638 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 F13A1P00488 732 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 PDGFRBP09619 1106 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 ZSCAN22P10073 491 aaPredicted RBP14.16□□□□□ -0.14
UBA3-210ENST00000485424 AFMP43652 599 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 IFNAR2P48551 515 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 PSMC1P62191 440 aaKnown RBP14.16□□□□□ -0.14
UBA3-210ENST00000485424 SNRPFP62306 86 aaKnown RBP14.16□□□□□ -0.14
UBA3-210ENST00000485424 FAM160A1Q05DH4 1040 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 PDGFRLQ15198 375 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 TMEM196Q5HYL7 178 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 SHC4Q6S5L8 630 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 CPA6Q8N4T0 437 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 XXYLT1Q8NBI6 393 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 OR6B3Q8NGW1 331 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 GAB3Q8WWW8 586 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 USP13Q92995 863 aaPredicted RBP14.16□□□□□ -0.14
UBA3-210ENST00000485424 CCDC127Q96BQ5 260 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 BLZF1Q9H2G9 400 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 AGPAT3Q9NRZ7 376 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 CGNQ9P2M7 1197 aaKnown RBP14.16□□□□□ -0.14
UBA3-210ENST00000485424 ASPMQ8IZT6 3477 aa14.16□□□□□ -0.14
UBA3-210ENST00000485424 TP53BP1Q12888 1972 aaPredicted RBP14.15□□□□□ -0.14
UBA3-210ENST00000485424 GABRDO14764 452 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 TRIM66O15016 1216 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 FOXD2O60548 495 aaPredicted RBP14.15□□□□□ -0.14
UBA3-210ENST00000485424 TADA3O75528 432 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 BDNFP23560 247 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 MAGEA11P43364 429 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 PXNP49023 591 aaPredicted RBP14.15□□□□□ -0.14
UBA3-210ENST00000485424 NR1H3Q13133 447 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 ZNF268Q14587 947 aaPredicted RBP14.15□□□□□ -0.14
UBA3-210ENST00000485424 MTF1Q14872 753 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 ATL3Q6DD88 541 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 CNNM4Q6P4Q7 775 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 VSTM1Q6UX27 236 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 TRAPPC11Q7Z392 1133 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 CXorf38Q8TB03 319 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 ATP2A3Q93084 1043 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 MYLPFQ96A32 169 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 MYRFLQ96LU7 910 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 CGRRF1Q99675 332 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 SLC39A2Q9NP94 309 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 DUS2Q9NX74 493 aaKnown RBP14.15□□□□□ -0.14
UBA3-210ENST00000485424 SLC8A2Q9UPR5 921 aa14.15□□□□□ -0.14
UBA3-210ENST00000485424 PTPRJQ12913 1337 aa14.15□□□□□ -0.15
UBA3-210ENST00000485424 PCNX2A6NKB5 2137 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 CCDC163A0A0D9SF12 145 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 PVALEFA0A1B0GWK0 134 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 TRDMT1O14717 391 aaKnown RBP14.14□□□□□ -0.15
UBA3-210ENST00000485424 HCRTO43612 131 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 EXOC3O60645 756 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 RNF40O75150 1001 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 ATP2C2O75185 946 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 RPP40O75818 363 aaKnown RBP14.14□□□□□ -0.15
UBA3-210ENST00000485424 EPN2O95208 641 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 ARSAP15289 507 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 WARSP23381 471 aaKnown RBP14.14□□□□□ -0.15
UBA3-210ENST00000485424 LMO2P25791 158 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 GNL1P36915 607 aaPredicted RBP14.14□□□□□ -0.15
UBA3-210ENST00000485424 RAP1GAPP47736 663 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 CYP24A1Q07973 514 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 PSMD2Q13200 908 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 PSMD6Q15008 389 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 SF3A2Q15428 464 aaKnown RBP14.14□□□□□ -0.15
UBA3-210ENST00000485424 CCDC6Q16204 474 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 FAM171BQ6P995 826 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 DENND5BQ6ZUT9 1274 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 EPM2AIP1Q7L775 607 aaPredicted RBP14.14□□□□□ -0.15
UBA3-210ENST00000485424 ARL14EPQ8N8R7 260 aaPredicted RBP14.14□□□□□ -0.15
UBA3-210ENST00000485424 SPRYD3Q8NCJ5 442 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 SYAP1Q96A49 352 aaPredicted RBP14.14□□□□□ -0.15
UBA3-210ENST00000485424 CEP295NLQ96MC4 621 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 PKMYT1Q99640 499 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 ARRDC1-AS1Q9H2J1 176 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 TRPM5Q9NZQ8 1165 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 PCDHA7Q9UN72 937 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 IGF2RP11717 2491 aa14.14□□□□□ -0.15
UBA3-210ENST00000485424 FAM208BQ5VWN6 2430 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 A8MXQ7 604 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 AXIN1O15169 862 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 TGFB1I1O43294 461 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 ABL1P00519 1130 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 EGFP01133 1207 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 CCDC192P0DO97 292 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 HDCP19113 662 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 DRD1P21728 446 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 CASP1P29466 404 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 LIMK1P53667 647 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 IFRD2Q12894 506 aaPredicted RBP14.13□□□□□ -0.15
UBA3-210ENST00000485424 BIRC3Q13489 604 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 CCDC142Q17RM4 750 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 KNOP1Q1ED39 458 aaKnown RBP14.13□□□□□ -0.15
UBA3-210ENST00000485424 WDR72Q3MJ13 1102 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 AASDHQ4L235 1098 aaPredicted RBP14.13□□□□□ -0.15
UBA3-210ENST00000485424 MDH1BQ5I0G3 518 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 NAIF1Q69YI7 327 aaPredicted RBP14.13□□□□□ -0.15
UBA3-210ENST00000485424 SCARA3Q6AZY7 606 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 CACNA2D4Q7Z3S7 1137 aa14.13□□□□□ -0.15
UBA3-210ENST00000485424 KBTBD6Q86V97 674 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms