RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	ANAPC4	Q9UJX5	808 aa		4.65	□□□□□ -1.67
VPS8-223	ENST00000485024	USP15	Q9Y4E8	981 aa	Predicted RBP	4.65	□□□□□ -1.67
VPS8-223	ENST00000485024	NCOA1	Q15788	1441 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	PREX1	Q8TCU6	1659 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	CFTR	P13569	1480 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	EPRS	P07814	1512 aa	Known RBP	4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	NT5C1B-RDH14	C9J2C7	533 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	APOL1	O14791	398 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	HNRNPDL	O14979	420 aa	Known RBP	4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	ADAMTS3	O15072	1205 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	THAP12	O43422	761 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	ANXA1	P04083	346 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	AMY1A	P04745	511 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	SNRPA1	P09661	255 aa	Known RBP	4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	ALAS1	P13196	640 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	PAX3	P23760	479 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	GRK6	P43250	576 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	GZMK	P49863	264 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	MAPK10	P53779	464 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	SUMO3	P55854	103 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	APBA1	Q02410	837 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	GRM1	Q13255	1194 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	BIRC3	Q13489	604 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	RAB32	Q13637	225 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	RALBP1	Q15311	655 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	AKNAD1	Q5T1N1	836 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	AWAT2	Q6E213	333 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	FAM90A1	Q86YD7	464 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	PDSS2	Q86YH6	399 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	MSL3	Q8N5Y2	521 aa	Known RBP	4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	VGLL2	Q8N8G2	317 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	SMRP1	Q8NCR6	262 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	PACSIN1	Q9BY11	444 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	ZNF518B	Q9C0D4	1074 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	PCDHA6	Q9UN73	950 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	CLCA2	Q9UQC9	943 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	MED16	Q9Y2X0	877 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	PCDHA1	Q9Y5I3	950 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	KIAA0556	O60303	1618 aa		4.64	□□□□□ -1.67
VPS8-223	ENST00000485024	TNS2	Q63HR2	1409 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	LRRC7	Q96NW7	1537 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	KRTAP9-6	A8MVA2	160 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024		B5MCH6	92 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	F2RL2	O00254	374 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	PJA2	O43164	708 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	SKAP2	O75563	359 aa	Predicted RBP	4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	CD1A	P06126	327 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	RAP2A	P10114	183 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	HSD3B1	P14060	373 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	ALOX15	P16050	662 aa	Predicted RBP	4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	SOX8	P57073	446 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	POU6F2	P78424	691 aa	Predicted RBP	4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	BLMH	Q13867	455 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	STARD3	Q14849	445 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	ARL13B	Q3SXY8	428 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	ARMC6	Q6NXE6	501 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	SEM1	Q6ZVN7	128 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	ATP11C	Q8NB49	1132 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	FANCB	Q8NB91	859 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	IL17RD	Q8NFM7	739 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	TNPO1	Q92973	898 aa	Known RBP	4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	IQCD	Q96DY2	449 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	MRGPRX1	Q96LB2	322 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	NT5C1B	Q96P26	610 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	ISCA1	Q9BUE6	129 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	CRB3	Q9BUF7	120 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	TRIM54	Q9BYV2	358 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	AGO4	Q9HCK5	861 aa	Known RBP	4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	GTF2A1L	Q9UNN4	478 aa		4.63	□□□□□ -1.67
VPS8-223	ENST00000485024	CPS1	P31327	1500 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	TOPBP1	Q92547	1522 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	MYO1C	O00159	1063 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	FFAR2	O15552	330 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	NBN	O60934	754 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	INMT	O95050	263 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	ELANE	P08246	267 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	XRCC6	P12956	609 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	IDE	P14735	1019 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	NPR1	P16066	1061 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	TSHR	P16473	764 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	ATP5J	P18859	108 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	ABCB4	P21439	1286 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	ARFIP2	P53365	341 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	RBM6	P78332	1123 aa	Known RBP	4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	TRIM14	Q14142	442 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	AMOT	Q4VCS5	1084 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	CCDC93	Q567U6	631 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	PRAMEF14	Q5SWL7	426 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	ANKS6	Q68DC2	871 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	TLDC1	Q6P9B6	456 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	PPP1R3B	Q86XI6	285 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	ZGPAT	Q8N5A5	531 aa	Known RBP	4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	NKAP	Q8N5F7	415 aa	Known RBP	4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	ZNF527	Q8NB42	609 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	MDM1	Q8TC05	714 aa		4.62	□□□□□ -1.67
VPS8-223	ENST00000485024	RAB24	Q969Q5	203 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms