RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 CLNS1AP54105 237 aaKnown RBP20.6■□□□□ 0.89
LIMS2-215ENST00000484252 IRX1P78414 480 aaPredicted RBP20.6■□□□□ 0.89
LIMS2-215ENST00000484252 GAD2Q05329 585 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 OTOAQ7RTW8 1153 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 UNC45BQ8IWX7 931 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 LRRC71Q8N4P6 559 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 DCAKDQ8WVC6 231 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 CYTH2Q99418 400 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 GPR20Q99678 358 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 VPS11Q9H270 941 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 ASNSD1Q9NWL6 643 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 BTBD7Q9P203 1132 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 TJP2Q9UDY2 1190 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 TNFSF13BQ9Y275 285 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 A0A0G2JMZ2 1700 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 A8MUI8 341 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 HNRNPCL1O60812 293 aaKnown RBP20.6■□□□□ 0.89
LIMS2-215ENST00000484252 TRUB2O95900 331 aaKnown RBP20.6■□□□□ 0.89
LIMS2-215ENST00000484252 KRT19P08727 400 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 MARK3P27448 753 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 MIPP30301 263 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 PTPN11Q06124 597 aaPredicted RBP20.6■□□□□ 0.89
LIMS2-215ENST00000484252 EFTUD2Q15029 972 aaKnown RBP eCLIP20.6■□□□□ 0.89
LIMS2-215ENST00000484252 LY6KQ17RY6 165 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 TMEM132AQ24JP5 1023 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 BBS9Q3SYG4 887 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 BANPQ8N9N5 519 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.6■□□□□ 0.89
LIMS2-215ENST00000484252 WDR83Q9BRX9 315 aaKnown RBP20.6■□□□□ 0.89
LIMS2-215ENST00000484252 CYP3A43Q9HB55 503 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 BATF3Q9NR55 127 aa20.6■□□□□ 0.89
LIMS2-215ENST00000484252 SPAG6O75602 509 aa20.59■□□□□ 0.89
LIMS2-215ENST00000484252 TMEM63AO94886 807 aa20.59■□□□□ 0.89
LIMS2-215ENST00000484252 RAP1GAPP47736 663 aa20.59■□□□□ 0.89
LIMS2-215ENST00000484252 CBLBQ13191 982 aa20.59■□□□□ 0.89
LIMS2-215ENST00000484252 DPYSL3Q14195 570 aa20.59■□□□□ 0.89
LIMS2-215ENST00000484252 EMC1Q8N766 993 aa20.59■□□□□ 0.89
LIMS2-215ENST00000484252 SLC4A11Q8NBS3 891 aa20.59■□□□□ 0.89
LIMS2-215ENST00000484252 NSMCE1Q8WV22 266 aa20.59■□□□□ 0.89
LIMS2-215ENST00000484252 THOC1Q96FV9 657 aaKnown RBP20.59■□□□□ 0.89
LIMS2-215ENST00000484252 C10orf88Q9H8K7 445 aa20.59■□□□□ 0.89
LIMS2-215ENST00000484252 SIX4Q9UIU6 781 aa20.59■□□□□ 0.89
LIMS2-215ENST00000484252 USP18Q9UMW8 372 aa20.59■□□□□ 0.89
LIMS2-215ENST00000484252 IQANK1A0A1B0GTG1 560 aa20.58■□□□□ 0.89
LIMS2-215ENST00000484252 NOP56O00567 594 aaKnown RBP20.58■□□□□ 0.89
LIMS2-215ENST00000484252 TRAFD1O14545 582 aaPredicted RBP20.58■□□□□ 0.89
LIMS2-215ENST00000484252 CD48P09326 243 aa20.58■□□□□ 0.89
LIMS2-215ENST00000484252 RBP3P10745 1247 aa20.58■□□□□ 0.89
LIMS2-215ENST00000484252 ATICP31939 592 aa20.58■□□□□ 0.89
LIMS2-215ENST00000484252 PSMC4P43686 418 aa20.58■□□□□ 0.89
LIMS2-215ENST00000484252 SLC26A2P50443 739 aa20.58■□□□□ 0.89
LIMS2-215ENST00000484252 FAM47CQ5HY64 1035 aa20.58■□□□□ 0.89
LIMS2-215ENST00000484252 NCAPG2Q86XI2 1143 aa20.58■□□□□ 0.89
LIMS2-215ENST00000484252 FAM71DQ8N9W8 422 aa20.58■□□□□ 0.89
LIMS2-215ENST00000484252 UTP4Q969X6 686 aaKnown RBP20.58■□□□□ 0.89
LIMS2-215ENST00000484252 TMEM176AQ96HP8 235 aa20.58■□□□□ 0.89
LIMS2-215ENST00000484252 SPATC1LQ9H0A9 340 aa20.58■□□□□ 0.89
LIMS2-215ENST00000484252 CDT1Q9H211 546 aa20.58■□□□□ 0.89
LIMS2-215ENST00000484252 SAR1AQ9NR31 198 aa20.58■□□□□ 0.89
LIMS2-215ENST00000484252 PCSK1NQ9UHG2 260 aa20.58■□□□□ 0.89
LIMS2-215ENST00000484252 INO80B-WBP1J3KQ70 363 aa20.58■□□□□ 0.88
LIMS2-215ENST00000484252 MICAL2O94851 1124 aa20.58■□□□□ 0.88
LIMS2-215ENST00000484252 HMGCRP04035 888 aa20.58■□□□□ 0.88
LIMS2-215ENST00000484252 ADRA1DP25100 572 aa20.58■□□□□ 0.88
LIMS2-215ENST00000484252 OSTNP61366 133 aa20.58■□□□□ 0.88
LIMS2-215ENST00000484252 BASP1P80723 227 aaKnown RBP20.58■□□□□ 0.88
LIMS2-215ENST00000484252 ROR1Q01973 937 aa20.58■□□□□ 0.88
LIMS2-215ENST00000484252 TFDP2Q14188 446 aa20.58■□□□□ 0.88
LIMS2-215ENST00000484252 CELF3Q5SZQ8 465 aaKnown RBP20.58■□□□□ 0.88
LIMS2-215ENST00000484252 CCDC125Q86Z20 511 aa20.58■□□□□ 0.88
LIMS2-215ENST00000484252 SPATA18Q8TC71 538 aa20.58■□□□□ 0.88
LIMS2-215ENST00000484252 TCP10LQ8TDR4 215 aa20.58■□□□□ 0.88
LIMS2-215ENST00000484252 HSPH1Q92598 858 aa20.58■□□□□ 0.88
LIMS2-215ENST00000484252 ANKRD27Q96NW4 1050 aa20.58■□□□□ 0.88
LIMS2-215ENST00000484252 INO80BQ9C086 356 aaPredicted RBP20.58■□□□□ 0.88
LIMS2-215ENST00000484252 SDCBP2Q9H190 292 aa20.58■□□□□ 0.88
LIMS2-215ENST00000484252 VRTNQ9H8Y1 702 aa20.58■□□□□ 0.88
LIMS2-215ENST00000484252 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.58■□□□□ 0.88
LIMS2-215ENST00000484252 LRRC37A2A6NM11 1700 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 TCRBV7S3A2A0A539 114 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 CILPO75339 1184 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 ENDOD1O94919 500 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 MT-ND3P03897 115 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 CXCL8P10145 99 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 P4HA1P13674 534 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 TARSP26639 723 aaKnown RBP20.57■□□□□ 0.88
LIMS2-215ENST00000484252 CCNG1P51959 295 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 ZNF143P52747 638 aaPredicted RBP20.57■□□□□ 0.88
LIMS2-215ENST00000484252 NOMO1Q15155 1222 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 TREML2Q5T2D2 321 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 EEF1DP3Q658K8 133 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 NLRP9Q7RTR0 991 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 MAB21L3Q8N8X9 362 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 C1orf127Q8N9H9 656 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 NLRP4Q96MN2 994 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 ADPGKQ9BRR6 497 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 CALN1Q9BXU9 219 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 FRMD8Q9BZ67 464 aaPredicted RBP20.57■□□□□ 0.88
LIMS2-215ENST00000484252 MIS12Q9H081 205 aa20.57■□□□□ 0.88
LIMS2-215ENST00000484252 HAO1Q9UJM8 370 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms