RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 TRMT5Q32P41 509 aaKnown RBP12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 HSP90AA5PQ58FG0 334 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 C1orf146Q5VVC0 180 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 C16orf87Q6PH81 154 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 NSMFQ6X4W1 530 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 RNF111Q6ZNA4 994 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 TRABD2AQ86V40 505 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 LARGE2Q8N3Y3 721 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 SHKBP1Q8TBC3 707 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 HELQQ8TDG4 1101 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 PYDC1Q8WXC3 89 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 ATG4AQ8WYN0 398 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 ACP6Q9NPH0 428 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 ANKFY1Q9P2R3 1169 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 RGS17Q9UGC6 210 aaPredicted RBP12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 SLC7A8Q9UHI5 535 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 PCDHGB4Q9UN71 923 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 LZTS1Q9Y250 596 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 PCDHGB5Q9Y5G0 923 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 THSD7AQ9UPZ6 1657 aa12.09□□□□□ -0.47
SEC61A1-205ENST00000483956 SLX4Q8IY92 1834 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 XPOTO43592 962 aaKnown RBP12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 DNAJC6O75061 913 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 CFBP00751 764 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 CA4P22748 312 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 MAPK4P31152 587 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 ADCY8P40145 1251 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 IGBP1P78318 339 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 TCP10Q12799 353 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 C16orf72Q14CZ0 275 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 TGFBIQ15582 683 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 ANKDD1AQ495B1 522 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 DHDDSQ86SQ9 333 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 SLC7A5P1Q8MH63 180 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 CCDC110Q8TBZ0 833 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 FAM172AQ8WUF8 416 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 C9orf72Q96LT7 481 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 TRABDQ9H4I3 376 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 LIN28AQ9H9Z2 209 aaKnown RBP12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 DNAJB4Q9UDY4 337 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 ANAPC7Q9UJX3 599 aa12.08□□□□□ -0.47
SEC61A1-205ENST00000483956 RGPD3A6NKT7 1758 aaPredicted RBP12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 RGPD4Q7Z3J3 1758 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 TTLL13PA6NNM8 815 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 H3BSA7 217 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 MAGEC1O60732 1142 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 GDF11O95390 407 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 ARP10275 920 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 ENTPD1P49961 510 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 STAT2P52630 851 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 TRIP13Q15645 432 aaPredicted RBP12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 C6orf163Q5TEZ5 329 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 ULK2Q8IYT8 1036 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 CCDC89Q8N998 374 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 ZNF398Q8TD17 642 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 SEMA4DQ92854 862 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 HERPUD2Q9BSE4 406 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 THTPAQ9BU02 230 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 MRPL1Q9BYD6 325 aaKnown RBP12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 OSBPL8Q9BZF1 889 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 TRPC7Q9HCX4 862 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 LRRC4BQ9NT99 713 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 IPO5O00410 1097 aaKnown RBP12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 PRPF4O43172 522 aaKnown RBP eCLIP12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 AP1G1O43747 822 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 ADRB2P07550 413 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 CACNB3P54284 484 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 KRT39Q6A163 491 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 PACS1Q6VY07 963 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 TDRPQ86YL5 185 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 SCAIQ8N9R8 606 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 RBM15BQ8NDT2 890 aaKnown RBP12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 SKA1Q96BD8 255 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 ARMC7Q9H6L4 198 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 ADAMTS6Q9UKP5 1117 aa12.08□□□□□ -0.48
SEC61A1-205ENST00000483956 FUOMA2VDF0 154 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 VCPP55072 806 aaKnown RBP12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 NOP14P78316 857 aaKnown RBP12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 FOLH1Q04609 750 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 CCNG2Q16589 344 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 MDH1BQ5I0G3 518 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 TMCO4Q5TGY1 634 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 LVRNQ6Q4G3 990 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 CROCCP3Q8IVE0 287 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 ZCCHC9Q8N567 271 aaKnown RBP12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 ZSWIM2Q8NEG5 633 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 PPP4R1Q8TF05 950 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 GDPD5Q8WTR4 605 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 MTBPQ96DY7 904 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 TRIM11Q96F44 468 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 TMEM8AQ9HCN3 771 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 CLEC11AQ9Y240 323 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 TIMM22Q9Y584 194 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 ARHGAP10A1A4S6 786 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 RRM1P23921 792 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 PKN2Q16513 984 aaKnown RBP12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 VPS50Q96JG6 964 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 NT5C1BQ96P26 610 aa12.07□□□□□ -0.48
SEC61A1-205ENST00000483956 TMEM120AQ9BXJ8 343 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms