RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 USP10Q14694 798 aaKnown RBP10.61□□□□□ -0.71
COL12A1-207ENST00000483888 MTFR1Q15390 333 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 SCFD1Q8WVM8 642 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 SP140LQ9H930 580 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 RAB25P57735 213 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 ZNF577Q9BSK1 485 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 PNPLA3Q9NST1 481 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 ACLYP53396 1101 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 TCIRG1Q13488 830 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 ALCAMQ13740 583 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 RNF43Q68DV7 783 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 OR6P1Q8NGX9 317 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 SEPHS2Q99611 448 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 MAP3K20Q9NYL2 800 aaKnown RBP10.61□□□□□ -0.71
COL12A1-207ENST00000483888 EDRF1Q3B7T1 1238 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 LIN52Q52LA3 116 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 TRIM65Q6PJ69 517 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 SATL1Q86VE3 508 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 SH3KBP1Q96B97 665 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 BABAM1Q9NWV8 329 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 COMMD8Q9NX08 183 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 WDR17Q8IZU2 1322 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 BMP10O95393 424 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 ZBTB11O95625 1053 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-207ENST00000483888 CYP19A1P11511 503 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-207ENST00000483888 NPR3P17342 541 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 CDH6P55285 790 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 TMC3Q7Z5M5 1100 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 LRRC4Q9HBW1 653 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 FEN1P39748 380 aaKnown RBP10.6□□□□□ -0.71
COL12A1-207ENST00000483888 SLC26A3P40879 764 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 AP1S2P56377 157 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 BNIP1Q12981 228 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 SIRT2Q8IXJ6 389 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 POU5F2Q8N7G0 328 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 FAR1Q8WVX9 515 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 INPP4BO15327 924 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 PROCP04070 461 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 UQCRBP14927 111 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 CCND2P30279 289 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 INTS2Q9H0H0 1204 aaKnown RBP10.6□□□□□ -0.71
COL12A1-207ENST00000483888 DNAJC11Q9NVH1 559 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 PTTG2Q9NZH5 202 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 PRKAR1AP10644 381 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 MAPKAPK2P49137 400 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 AASDHPPTQ9NRN7 309 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 NUDT5Q9UKK9 219 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 CYP2D7A0A087X1C5 515 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 ATF6P18850 670 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 ANXA13P27216 316 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 TAP1Q03518 808 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 TRIM72Q6ZMU5 477 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 TMEM35BQ8NCS4 154 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 OGDHLQ9ULD0 1010 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 ZHX2Q9Y6X8 837 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 LAMC1P11047 1609 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 PLCH2O75038 1416 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 ATG7O95352 703 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 FCER1AP12319 257 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 MAGP20916 626 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 RFC4P35249 363 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 NME5P56597 212 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 FBXW4P57775 412 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 SLCO6A1Q86UG4 719 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 FBXO11Q86XK2 927 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 CAMKK1Q8N5S9 505 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 KIF1BO60333 1816 aa10.6□□□□□ -0.71
COL12A1-207ENST00000483888 MYO18AQ92614 2054 aaKnown RBP10.6□□□□□ -0.71
COL12A1-207ENST00000483888 HS6ST1O60243 411 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 HOXB7P09629 217 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 RPA1P27694 616 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 SPRP35270 261 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 CDK16Q00536 496 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 FAM98BQ52LJ0 330 aaKnown RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 KHDRBS2Q5VWX1 349 aaKnown RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 TMEM26Q6ZUK4 368 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 SETD9Q8NE22 299 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 TSPAN17Q96FV3 270 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 GPHNQ9NQX3 736 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 ZSWIM5Q9P217 1185 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 IFT140Q96RY7 1462 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 LOC110117498-PIK3R3F6TDL0 507 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 RNMTO43148 476 aaKnown RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 IFI35P80217 286 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 ZNF394Q53GI3 561 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 DHFR2Q86XF0 187 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 PPIL6Q8IXY8 311 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 TSEN2Q8NCE0 465 aaKnown RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 ZSWIM2Q8NEG5 633 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 OSCP1Q8WVF1 389 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 DLG3Q92796 817 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 EME2A4GXA9 379 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 PLEKP08567 350 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 SKIV2L2P42285 1042 aaKnown RBP10.59□□□□□ -0.71
COL12A1-207ENST00000483888 VAMP7P51809 220 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 BHLHB9Q6PI77 547 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 MIER2Q8N344 545 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 STARD13Q9Y3M8 1113 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 STK36Q9NRP7 1315 aa10.59□□□□□ -0.71
COL12A1-207ENST00000483888 C15orf38-AP3S2A0A0A6YYH1 394 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms