RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, human

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHOX2-204	ENST00000483851	GPD1	P21695	349 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	IGFBP6	P24592	240 aa	Predicted RBP	27.57	■■■□□ 2
SHOX2-204	ENST00000483851	PCK1	P35558	622 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	RGS7	P49802	495 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	CLLU1OS	Q5K130	101 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	ZNF771	Q7L3S4	317 aa	Predicted RBP	27.57	■■■□□ 2
SHOX2-204	ENST00000483851	PRELID2	Q8N945	189 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	DBF4B	Q8NFT6	615 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	SUSD3	Q96L08	255 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	ACBD6	Q9BR61	282 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	PCYOX1	Q9UHG3	505 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	NR2E1	Q9Y466	385 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	DNAH12	Q6ZR08	3092 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	DCDC2C	A8MYV0	355 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	BHMG1	C9JSJ3	638 aa	Predicted RBP	27.57	■■■□□ 2
SHOX2-204	ENST00000483851	TULP2	O00295	520 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	GLI1	P08151	1106 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	TYMP	P19971	482 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	PTPN7	P35236	360 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	MRPS25	P82663	173 aa	Known RBP	27.57	■■■□□ 2
SHOX2-204	ENST00000483851	KCTD13	Q8WZ19	329 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	LPIN3	Q9BQK8	851 aa		27.57	■■■□□ 2
SHOX2-204	ENST00000483851	TANC1	Q9C0D5	1861 aa		27.56	■■■□□ 2
SHOX2-204	ENST00000483851	FAM187A	A6NFU0	413 aa		27.56	■■■□□ 2
SHOX2-204	ENST00000483851	PAPSS1	O43252	624 aa	Predicted RBP	27.56	■■■□□ 2
SHOX2-204	ENST00000483851	PQBP1	O60828	265 aa	Known RBP	27.56	■■■□□ 2
SHOX2-204	ENST00000483851	LRCH4	O75427	683 aa		27.56	■■■□□ 2
SHOX2-204	ENST00000483851	SYF2	O95926	243 aa	Known RBP	27.56	■■■□□ 2
SHOX2-204	ENST00000483851	NPR3	P17342	541 aa		27.56	■■■□□ 2
SHOX2-204	ENST00000483851	TNNT3	P45378	269 aa	Predicted RBP	27.56	■■■□□ 2
SHOX2-204	ENST00000483851	FNTA	P49354	379 aa		27.56	■■■□□ 2
SHOX2-204	ENST00000483851	SIX1	Q15475	284 aa	Predicted RBP	27.56	■■■□□ 2
SHOX2-204	ENST00000483851	LRRC19	Q9H756	370 aa		27.56	■■■□□ 2
SHOX2-204	ENST00000483851	TSC2	P49815	1807 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	MYC	P01106	439 aa	Predicted RBP	27.55	■■■□□ 2
SHOX2-204	ENST00000483851	TKT	P29401	623 aa	Known RBP	27.55	■■■□□ 2
SHOX2-204	ENST00000483851	DAB2IP	Q5VWQ8	1189 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	SLC26A9	Q7LBE3	791 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	EMC1	Q8N766	993 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	CRTAC1	Q9NQ79	661 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	PSD3	Q9NYI0	1048 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	AMACR	Q9UHK6	382 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	ADAM21	Q9UKJ8	722 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	HOXA2	O43364	376 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	ATP2C2	O75185	946 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	CXCL10	P02778	98 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	IBSP	P21815	317 aa	Predicted RBP	27.55	■■■□□ 2
SHOX2-204	ENST00000483851	ACAT1	P24752	427 aa	Known RBP	27.55	■■■□□ 2
SHOX2-204	ENST00000483851	MNX1	P50219	401 aa	Predicted RBP	27.55	■■■□□ 2
SHOX2-204	ENST00000483851	GUCY2D	Q02846	1103 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	SLC25A11	Q02978	314 aa	Known RBP	27.55	■■■□□ 2
SHOX2-204	ENST00000483851	EMB	Q6PCB8	327 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	PAQR9	Q6ZVX9	377 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	CCDC50	Q8IVM0	306 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	MYCBPAP	Q8TBZ2	947 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	CAVIN3	Q969G5	261 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	EXOC4	Q96A65	974 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	HINFP	Q9BQA5	517 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	OSBPL8	Q9BZF1	889 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	EPB41L5	Q9HCM4	733 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	PCDHB7	Q9Y5E2	793 aa		27.55	■■■□□ 2
SHOX2-204	ENST00000483851	GABBR2	O75899	941 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	RARA	P10276	462 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	PDGFRA	P16234	1089 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	EPHB4	P54760	987 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	CUL1	Q13616	776 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	MDH1B	Q5I0G3	518 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	KIAA0319	Q5VV43	1072 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	ADAT2	Q7Z6V5	191 aa	Known RBP	27.54	■■■□□ 2
SHOX2-204	ENST00000483851	CTU1	Q7Z7A3	348 aa	Known RBP	27.54	■■■□□ 2
SHOX2-204	ENST00000483851	SCUBE3	Q8IX30	993 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	COLGALT2	Q8IYK4	626 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	ZDHHC14	Q8IZN3	488 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	RXFP2	Q8WXD0	754 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	SEC14L1	Q92503	715 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	MAGOHB	Q96A72	148 aa	Known RBP	27.54	■■■□□ 2
SHOX2-204	ENST00000483851	ZNF333	Q96JL9	665 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	RAB17	Q9H0T7	212 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	HIPK3	Q9H422	1215 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	TBC1D13	Q9NVG8	400 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	EFR3B	Q9Y2G0	817 aa		27.54	■■■□□ 2
SHOX2-204	ENST00000483851	FAM200B	P0CF97	657 aa		27.53	■■■□□ 2
SHOX2-204	ENST00000483851	DR1	Q01658	176 aa		27.53	■■■□□ 2
SHOX2-204	ENST00000483851	KLF1	Q13351	362 aa	Predicted RBP	27.53	■■■□□ 2
SHOX2-204	ENST00000483851	MAPRE1	Q15691	268 aa	Known RBP	27.53	■■■□□ 2
SHOX2-204	ENST00000483851	ODF2	Q5BJF6	829 aa		27.53	■■■□□ 2
SHOX2-204	ENST00000483851	FBXO46	Q6PJ61	603 aa	Predicted RBP	27.53	■■■□□ 2
SHOX2-204	ENST00000483851	THEM5	Q8N1Q8	247 aa		27.53	■■■□□ 2
SHOX2-204	ENST00000483851	PCDHB8	Q9UN66	801 aa		27.53	■■■□□ 2
SHOX2-204	ENST00000483851	AGPS	O00116	658 aa		27.53	■■■□□ 2
SHOX2-204	ENST00000483851	GYS2	P54840	703 aa		27.53	■■■□□ 2
SHOX2-204	ENST00000483851	EFHC1	Q5JVL4	640 aa		27.53	■■■□□ 2
SHOX2-204	ENST00000483851	PIGZ	Q86VD9	579 aa		27.53	■■■□□ 2
SHOX2-204	ENST00000483851	ARFGAP1	Q8N6T3	406 aa		27.53	■■■□□ 2
SHOX2-204	ENST00000483851	ANKLE1	Q8NAG6	615 aa		27.53	■■■□□ 2
SHOX2-204	ENST00000483851	KHSRP	Q92945	711 aa	Known RBP eCLIP	27.53	■■■□□ 2
SHOX2-204	ENST00000483851	SLCO2A1	Q92959	643 aa		27.53	■■■□□ 2
SHOX2-204	ENST00000483851	GDAP1L1	Q96MZ0	367 aa		27.53	■■■□□ 2
SHOX2-204	ENST00000483851	FAM193B	Q96PV7	902 aa	Predicted RBP	27.53	■■■□□ 2
SHOX2-204	ENST00000483851	SLITRK1	Q96PX8	696 aa		27.53	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms