RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 SPATA17Q96L03 361 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 FNBP1Q96RU3 617 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 B3GNT5Q9BYG0 378 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 SNX25Q9H3E2 840 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 NXF1Q9UBU9 619 aaKnown RBP19.24■□□□□ 0.67
ATG4B-221ENST00000483778 GMEB2Q9UKD1 530 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 RCOR1Q9UKL0 485 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 RAB23Q9ULC3 237 aa19.24■□□□□ 0.67
ATG4B-221ENST00000483778 PVALEFA0A1B0GWK0 134 aa19.23■□□□□ 0.67
ATG4B-221ENST00000483778 DCDC2BA2VCK2 349 aa19.23■□□□□ 0.67
ATG4B-221ENST00000483778 F8VP50 259 aa19.23■□□□□ 0.67
ATG4B-221ENST00000483778 ACTN4O43707 911 aaKnown RBP19.23■□□□□ 0.67
ATG4B-221ENST00000483778 RNF40O75150 1001 aa19.23■□□□□ 0.67
ATG4B-221ENST00000483778 GRSF1Q12849 480 aaKnown RBP eCLIP19.23■□□□□ 0.67
ATG4B-221ENST00000483778 STK4Q13043 487 aa19.23■□□□□ 0.67
ATG4B-221ENST00000483778 PDGFRLQ15198 375 aa19.23■□□□□ 0.67
ATG4B-221ENST00000483778 KNOP1Q1ED39 458 aaKnown RBP19.23■□□□□ 0.67
ATG4B-221ENST00000483778 VSTM1Q6UX27 236 aa19.23■□□□□ 0.67
ATG4B-221ENST00000483778 HS2ST1Q7LGA3 356 aa19.23■□□□□ 0.67
ATG4B-221ENST00000483778 WDR5BQ86VZ2 330 aa19.23■□□□□ 0.67
ATG4B-221ENST00000483778 FAM160A2Q8N612 972 aaPredicted RBP19.23■□□□□ 0.67
ATG4B-221ENST00000483778 GPR161Q8N6U8 529 aaKnown RBP19.23■□□□□ 0.67
ATG4B-221ENST00000483778 OSCP1Q8WVF1 389 aa19.23■□□□□ 0.67
ATG4B-221ENST00000483778 ZNF518BQ9C0D4 1074 aa19.23■□□□□ 0.67
ATG4B-221ENST00000483778 SCAMP3O14828 347 aaKnown RBP19.22■□□□□ 0.67
ATG4B-221ENST00000483778 TACC1O75410 805 aa19.22■□□□□ 0.67
ATG4B-221ENST00000483778 RETP07949 1114 aa19.22■□□□□ 0.67
ATG4B-221ENST00000483778 GAB4Q2WGN9 574 aa19.22■□□□□ 0.67
ATG4B-221ENST00000483778 C12orf56Q8IXR9 622 aa19.22■□□□□ 0.67
ATG4B-221ENST00000483778 KIAA0895Q8NCT3 520 aa19.22■□□□□ 0.67
ATG4B-221ENST00000483778 PAGE5Q96GU1 130 aa19.22■□□□□ 0.67
ATG4B-221ENST00000483778 P2RY13Q9BPV8 354 aa19.22■□□□□ 0.67
ATG4B-221ENST00000483778 TTLL2Q9BWV7 592 aa19.22■□□□□ 0.67
ATG4B-221ENST00000483778 SDCBP2Q9H190 292 aa19.22■□□□□ 0.67
ATG4B-221ENST00000483778 SMYD3Q9H7B4 428 aa19.22■□□□□ 0.67
ATG4B-221ENST00000483778 DMAC2Q9NW81 257 aa19.22■□□□□ 0.67
ATG4B-221ENST00000483778 UBE4BO95155 1302 aa19.22■□□□□ 0.67
ATG4B-221ENST00000483778 ZNF840PA6NDX5 716 aa19.21■□□□□ 0.67
ATG4B-221ENST00000483778 GDF9O60383 454 aa19.21■□□□□ 0.67
ATG4B-221ENST00000483778 VNN1O95497 513 aa19.21■□□□□ 0.67
ATG4B-221ENST00000483778 RAP1GAPP47736 663 aa19.21■□□□□ 0.67
ATG4B-221ENST00000483778 DLG4P78352 724 aa19.21■□□□□ 0.67
ATG4B-221ENST00000483778 CCDC6Q16204 474 aa19.21■□□□□ 0.67
ATG4B-221ENST00000483778 TDRD10Q5VZ19 366 aaKnown RBP19.21■□□□□ 0.67
ATG4B-221ENST00000483778 DENND5BQ6ZUT9 1274 aa19.21■□□□□ 0.67
ATG4B-221ENST00000483778 PAQR9Q6ZVX9 377 aa19.21■□□□□ 0.67
ATG4B-221ENST00000483778 HSCBQ8IWL3 235 aa19.21■□□□□ 0.67
ATG4B-221ENST00000483778 MAGEF1Q9HAY2 307 aa19.21■□□□□ 0.67
ATG4B-221ENST00000483778 SEMA4GQ9NTN9 838 aa19.21■□□□□ 0.67
ATG4B-221ENST00000483778 FAM13BQ9NYF5 915 aa19.21■□□□□ 0.67
ATG4B-221ENST00000483778 ARHGAP26Q9UNA1 814 aa19.21■□□□□ 0.67
ATG4B-221ENST00000483778 ZDHHC9Q9Y397 364 aa19.21■□□□□ 0.67
ATG4B-221ENST00000483778 CNOT1A5YKK6 2376 aaKnown RBP19.21■□□□□ 0.67
ATG4B-221ENST00000483778 A0A1B0GVL5 298 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 LRRIQ3A6PVS8 624 aaPredicted RBP19.2■□□□□ 0.66
ATG4B-221ENST00000483778 LEFTY2O00292 366 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 AXIN1O15169 862 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 EXOC3O60645 756 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 C4BPAP04003 597 aaKnown RBP19.2■□□□□ 0.66
ATG4B-221ENST00000483778 SLFN14P0C7P3 912 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 CNR2P34972 360 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 IFNAR2P48551 515 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 SNRPFP62306 86 aaKnown RBP19.2■□□□□ 0.66
ATG4B-221ENST00000483778 LMNB2Q03252 620 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 MESP2Q0VG99 397 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 TAF10Q12962 218 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 KCNB1Q14721 858 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 MAPRE1Q15691 268 aaKnown RBP19.2■□□□□ 0.66
ATG4B-221ENST00000483778 KMT5BQ4FZB7 885 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 CEP68Q76N32 757 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 KBTBD6Q86V97 674 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 SFTPA1Q8IWL2 248 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 CPA6Q8N4T0 437 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 FSIP1Q8NA03 581 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 PARD3BQ8TEW8 1205 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 C8orf48Q96LL4 319 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 HHIPQ96QV1 700 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 KCNK16Q96T55 309 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 TRPM5Q9NZQ8 1165 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 THADAQ6YHU6 1953 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 NUP205Q92621 2012 aa19.2■□□□□ 0.66
ATG4B-221ENST00000483778 A8MXQ7 604 aa19.19■□□□□ 0.66
ATG4B-221ENST00000483778 PRR5-ARHGAP8B1AHC4 643 aa19.19■□□□□ 0.66
ATG4B-221ENST00000483778 PHACTR2O75167 634 aa19.19■□□□□ 0.66
ATG4B-221ENST00000483778 ABL1P00519 1130 aa19.19■□□□□ 0.66
ATG4B-221ENST00000483778 FAM163BP0C2L3 166 aa19.19■□□□□ 0.66
ATG4B-221ENST00000483778 OPRD1P41143 372 aa19.19■□□□□ 0.66
ATG4B-221ENST00000483778 TNNC1P63316 161 aa19.19■□□□□ 0.66
ATG4B-221ENST00000483778 NOP14P78316 857 aaKnown RBP19.19■□□□□ 0.66
ATG4B-221ENST00000483778 ARHGAP8P85298 464 aa19.19■□□□□ 0.66
ATG4B-221ENST00000483778 TRPC3Q13507 836 aa19.19■□□□□ 0.66
ATG4B-221ENST00000483778 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.19■□□□□ 0.66
ATG4B-221ENST00000483778 B3GALNT2Q8NCR0 500 aa19.19■□□□□ 0.66
ATG4B-221ENST00000483778 RPLP0P6Q8NHW5 317 aa19.19■□□□□ 0.66
ATG4B-221ENST00000483778 CD101Q93033 1021 aa19.19■□□□□ 0.66
ATG4B-221ENST00000483778 ATP2A3Q93084 1043 aa19.19■□□□□ 0.66
ATG4B-221ENST00000483778 KCTD10Q9H3F6 313 aa19.19■□□□□ 0.66
ATG4B-221ENST00000483778 SMPD4Q9NXE4 827 aa19.19■□□□□ 0.66
ATG4B-221ENST00000483778 CDV3Q9UKY7 258 aaKnown RBP19.19■□□□□ 0.66
ATG4B-221ENST00000483778 SLC8A2Q9UPR5 921 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms