RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 CYP2D7A0A087X1C5 515 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 TCRBV16S1A1N1A0A5B0 115 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 ATP2A1O14983 1001 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 LINC01565O15544 149 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 PRKAB2O43741 272 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 ADH4P08319 380 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 NAT1P18440 290 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 APEX1P27695 318 aaKnown RBP4.19□□□□□ -1.74
LRCH3-217ENST00000483442 NBL1P41271 181 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 RRP1P56182 461 aaKnown RBP4.19□□□□□ -1.74
LRCH3-217ENST00000483442 ALDH6A1Q02252 535 aaKnown RBP4.19□□□□□ -1.74
LRCH3-217ENST00000483442 HHEXQ03014 270 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 DUSP28Q4G0W2 176 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 BRDTQ58F21 947 aaPredicted RBP4.19□□□□□ -1.74
LRCH3-217ENST00000483442 TRIM61Q5EBN2 209 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 NFRKBQ6P4R8 1299 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 KIAA2013Q8IYS2 634 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 IGSF22Q8N9C0 903 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 FAM133AQ8N9E0 248 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 WDR48Q8TAF3 677 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 RIPOR3Q96MK2 946 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 MEIS3Q99687 375 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 RIOK1Q9BRS2 568 aaKnown RBP4.19□□□□□ -1.74
LRCH3-217ENST00000483442 WDR11Q9BZH6 1224 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 CRNKL1Q9BZJ0 848 aaKnown RBP4.19□□□□□ -1.74
LRCH3-217ENST00000483442 CLIP2Q9UDT6 1046 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 SWAP70Q9UH65 585 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 RALYQ9UKM9 306 aaKnown RBP4.19□□□□□ -1.74
LRCH3-217ENST00000483442 ISY1Q9ULR0 285 aaKnown RBP4.19□□□□□ -1.74
LRCH3-217ENST00000483442 REXO2Q9Y3B8 237 aaKnown RBP4.19□□□□□ -1.74
LRCH3-217ENST00000483442 FPGT-TNNI3KV9GXZ4 949 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 CACNA1FO60840 1977 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 COL4A6Q14031 1691 aa4.19□□□□□ -1.74
LRCH3-217ENST00000483442 SCN5AQ14524 2016 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 PNMA6EA0A0J9YXQ4 647 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 A0A1W2PRX2 142 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 SLC12A8A0AV02 714 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 LOC730098B7Z3J9 87 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 GRM6O15303 877 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 MAFO75444 373 aaPredicted RBP4.18□□□□□ -1.74
LRCH3-217ENST00000483442 CXCL10P02778 98 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 CKBP12277 381 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 ALAS1P13196 640 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 MAKP20794 623 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 NDUFV1P49821 464 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 CPT1AP50416 773 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 PTTG1IPP53801 180 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 SNAP25P60880 206 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 HTRA4P83105 476 aaPredicted RBP4.18□□□□□ -1.74
LRCH3-217ENST00000483442 IRF9Q00978 393 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 OS9Q13438 667 aaPredicted RBP4.18□□□□□ -1.74
LRCH3-217ENST00000483442 LONRF2Q1L5Z9 754 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 TMEM177Q53S58 311 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 ZNF618Q5T7W0 954 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 SLC9C2Q5TAH2 1124 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 GAREM2Q75VX8 874 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 LRRC8DQ7L1W4 858 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 BRAPQ7Z569 592 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 RBM23Q86U06 439 aaKnown RBP4.18□□□□□ -1.74
LRCH3-217ENST00000483442 ULK2Q8IYT8 1036 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 DBF4BQ8NFT6 615 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 OR6J1Q8NGC5 347 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 CAGE1Q8TC20 777 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 AFAP1L1Q8TED9 768 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 MAGEB10Q96LZ2 347 aaPredicted RBP4.18□□□□□ -1.74
LRCH3-217ENST00000483442 YME1L1Q96TA2 773 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 DNAJC7Q99615 494 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 ACAD9Q9H845 621 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 ARMT1Q9H993 441 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 SLC38A10Q9HBR0 1119 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 TRIM39Q9HCM9 518 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 A1CFQ9NQ94 594 aaKnown RBP4.18□□□□□ -1.74
LRCH3-217ENST00000483442 AURKAIP1Q9NWT8 199 aaPredicted RBP4.18□□□□□ -1.74
LRCH3-217ENST00000483442 SIRPGQ9P1W8 387 aa4.18□□□□□ -1.74
LRCH3-217ENST00000483442 NOB1Q9ULX3 412 aaKnown RBP4.18□□□□□ -1.74
LRCH3-217ENST00000483442 RBM8AQ9Y5S9 174 aaKnown RBP4.18□□□□□ -1.74
LRCH3-217ENST00000483442 CACNA1BQ00975 2339 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 RIF1Q5UIP0 2472 aaKnown RBP4.17□□□□□ -1.74
LRCH3-217ENST00000483442 TMEM232C9JQI7 657 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 KPNA6O60684 536 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 EFCAB14O75071 495 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 TBX10O75333 385 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 SURF6O75683 361 aaKnown RBP4.17□□□□□ -1.74
LRCH3-217ENST00000483442 PARNO95453 639 aaKnown RBP4.17□□□□□ -1.74
LRCH3-217ENST00000483442 EYA4O95677 639 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 NDUFB10O96000 172 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 PRLP01236 227 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 GNAI3P08754 354 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 TXNP10599 105 aaKnown RBP4.17□□□□□ -1.74
LRCH3-217ENST00000483442 SP100P23497 879 aaPredicted RBP4.17□□□□□ -1.74
LRCH3-217ENST00000483442 CTNNB1P35222 781 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 BMPR1AP36894 532 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 MECP2P51608 486 aaKnown RBP4.17□□□□□ -1.74
LRCH3-217ENST00000483442 TOB2Q14106 344 aaPredicted RBP4.17□□□□□ -1.74
LRCH3-217ENST00000483442 MUM1L1Q5H9M0 696 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 C12orf60Q5U649 245 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 C1QL3Q5VWW1 255 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 KLHDC10Q6PID8 442 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 MRGPRGQ86SM5 289 aa4.17□□□□□ -1.74
LRCH3-217ENST00000483442 LCORLQ8N3X6 602 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms