RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ZBTB44Q8NCP5 570 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 CPLX3Q8WVH0 158 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 CLDN23Q96B33 292 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 C8orf76Q96K31 380 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 ACAP3Q96P50 834 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 CORO1BQ9BR76 489 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 TCHPQ9BT92 498 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 IER2Q9BTL4 223 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 TRMT61BQ9BVS5 477 aaKnown RBP6.41□□□□□ -1.38
CSDE1-207ENST00000483407 MRPL4Q9BYD3 311 aaKnown RBP6.41□□□□□ -1.38
CSDE1-207ENST00000483407 FAM126AQ9BYI3 521 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-207ENST00000483407 RAB34Q9BZG1 259 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 CXCL16Q9H2A7 254 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 BHMT2Q9H2M3 363 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 FOXP1Q9H334 677 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-207ENST00000483407 BRD9Q9H8M2 597 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 CYP4F11Q9HBI6 524 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 GOLGA2P5Q9HBQ8 144 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 GMEB2Q9UKD1 530 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 RAB23Q9ULC3 237 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 PPT2Q9UMR5 302 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 NOL7Q9UMY1 257 aaKnown RBP6.41□□□□□ -1.38
CSDE1-207ENST00000483407 SMG5Q9UPR3 1016 aaKnown RBP6.41□□□□□ -1.38
CSDE1-207ENST00000483407 TNFSF13BQ9Y275 285 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 MTF2Q9Y483 593 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-207ENST00000483407 GVINP1Q7Z2Y8 2422 aa6.41□□□□□ -1.38
CSDE1-207ENST00000483407 KMT2BQ9UMN6 2715 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-207ENST00000483407 C2orf16Q68DN1 1984 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 WDR27A2RRH5 827 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 PRR5-ARHGAP8B1AHC4 643 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 M0R082 166 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 OIP5O43482 229 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 ABLIM3O94929 683 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 LARGE1O95461 756 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 BPNT1O95861 308 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 EDN1P05305 212 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 MCF2P10911 925 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 KCNE1P15382 129 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 CEBPBP17676 345 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 MARCKSP29966 332 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-207ENST00000483407 CDC25BP30305 580 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 RPL9P32969 192 aaKnown RBP6.4□□□□□ -1.38
CSDE1-207ENST00000483407 MCM4P33991 863 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 NPTX2P47972 431 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 GIPRP48546 466 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 PEX3P56589 373 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 OSTNP61366 133 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 ARHGAP8P85298 464 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 GUCY1B3Q02153 619 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 SLC5A9Q2M3M2 681 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 CTXN3Q4LDR2 81 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 XKR4Q5GH76 650 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 TTC38Q5R3I4 469 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 TPGS2Q68CL5 300 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 TANGO2Q6ICL3 276 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 ZNF280DQ6N043 979 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 TXNDC11Q6PKC3 985 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 CD300LGQ6UXG3 332 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 C8orf86Q6ZUL3 223 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 WFDC8Q8IUA0 241 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 TCEAL8Q8IYN2 117 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 APPL2Q8NEU8 664 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 ZNF417Q8TAU3 575 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 DEPDC1BQ8WUY9 529 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 FAM3CQ92520 227 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 BTBD6Q96KE9 485 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 ZNF512Q96ME7 567 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-207ENST00000483407 ZNF587Q96SQ5 575 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-207ENST00000483407 ACO2Q99798 780 aaKnown RBP6.4□□□□□ -1.38
CSDE1-207ENST00000483407 PLA2G2FQ9BZM2 168 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 CDT1Q9H211 546 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 EPC1Q9H2F5 836 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 PIF1Q9H611 641 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 KMT5AQ9NQR1 393 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 PRMT8Q9NR22 394 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-207ENST00000483407 HEBP1Q9NRV9 189 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 KRT82Q9NSB4 513 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 DDX19AQ9NUU7 478 aaKnown RBP6.4□□□□□ -1.38
CSDE1-207ENST00000483407 LRWD1Q9UFC0 647 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 KCNG1Q9UIX4 513 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 MAFFQ9ULX9 164 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 USP18Q9UMW8 372 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 NDRG2Q9UN36 371 aaKnown RBP6.4□□□□□ -1.38
CSDE1-207ENST00000483407 DNM3Q9UQ16 869 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 INSL5Q9Y5Q6 135 aa6.4□□□□□ -1.38
CSDE1-207ENST00000483407 EP300Q09472 2414 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-207ENST00000483407 CHD6Q8TD26 2715 aa6.4□□□□□ -1.39
CSDE1-207ENST00000483407 ZNF263O14978 683 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 ATE1O95260 518 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 HARSP12081 509 aaKnown RBP6.39□□□□□ -1.39
CSDE1-207ENST00000483407 PSMC3P17980 439 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 IGFBP6P24592 240 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-207ENST00000483407 GDI1P31150 447 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 CCR3P51677 355 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 HMGN5P82970 282 aaKnown RBP6.39□□□□□ -1.39
CSDE1-207ENST00000483407 SOX4Q06945 474 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-207ENST00000483407 TWF1Q12792 350 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 STRN3Q13033 797 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 MTAPQ13126 283 aa6.39□□□□□ -1.39
CSDE1-207ENST00000483407 PLD1Q13393 1074 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms