RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 GJB2P29033 226 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 TIE1P35590 1138 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 GRIK1P39086 918 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 MAGEA11P43364 429 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 MAPK8P45983 427 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 PDE6CP51160 858 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 LMAN2Q12907 356 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 GAB4Q2WGN9 574 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 KIAA1211LQ6NV74 962 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 ARMCX6Q7L4S7 300 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 FILIP1Q7Z7B0 1213 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 SFTPA1Q8IWL2 248 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 BRSK2Q8IWQ3 736 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 ADGRF2Q8IZF7 708 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 TOP6BLQ8N6T0 577 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 LRRC52Q8N7C0 313 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 TXNDC5Q8NBS9 432 aaKnown RBP13.72□□□□□ -0.21
TMEM54-206ENST00000482771 OLIG1Q8TAK6 271 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 NOC3LQ8WTT2 800 aaKnown RBP13.72□□□□□ -0.21
TMEM54-206ENST00000482771 GATA6Q92908 595 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 ACCSQ96QU6 501 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 FNBP1Q96RU3 617 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 STRA6Q9BX79 667 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 NUSAP1Q9BXS6 441 aaKnown RBP13.72□□□□□ -0.21
TMEM54-206ENST00000482771 RNF38Q9H0F5 515 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 PDE11AQ9HCR9 933 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 TMEM74BQ9NUR3 256 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 RBAKQ9NYW8 714 aaPredicted RBP13.72□□□□□ -0.21
TMEM54-206ENST00000482771 EVLQ9UI08 416 aaPredicted RBP13.72□□□□□ -0.21
TMEM54-206ENST00000482771 ITGA11Q9UKX5 1188 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 TCHHQ07283 1943 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 PI4KAP42356 2102 aa13.72□□□□□ -0.21
TMEM54-206ENST00000482771 TSC2P49815 1807 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 SGK1O00141 431 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 TNFRSF10BO14763 440 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 SCAMP3O14828 347 aaKnown RBP13.71□□□□□ -0.21
TMEM54-206ENST00000482771 HYAL3O43820 417 aaPredicted RBP13.71□□□□□ -0.21
TMEM54-206ENST00000482771 PPP1R37O75864 691 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 LDHAP00338 332 aaKnown RBP13.71□□□□□ -0.21
TMEM54-206ENST00000482771 ABL1P00519 1130 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 PDGFRBP09619 1106 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 BDNFP23560 247 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 P2RY2P41231 377 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 PTGER3P43115 390 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 USP46P62068 366 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 MESP2Q0VG99 397 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 DHCR24Q15392 516 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 RHBDF2Q6PJF5 856 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 C4orf50Q6ZRC1 276 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 USP49Q70CQ1 688 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 SYT12Q8IV01 421 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 SYCP3Q8IZU3 236 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 PGBD3Q8N328 593 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 IL17RCQ8NAC3 791 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 SPATA18Q8TC71 538 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 HVCN1Q96D96 273 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 EPSTI1Q96J88 318 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 SPATA17Q96L03 361 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 PNKPQ96T60 521 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 PCIF1Q9H4Z3 704 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 SLC32A1Q9H598 525 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 BCCIPQ9P287 314 aaKnown RBP eCLIP13.71□□□□□ -0.21
TMEM54-206ENST00000482771 MBD1Q9UIS9 605 aaPredicted RBP13.71□□□□□ -0.21
TMEM54-206ENST00000482771 SIX4Q9UIU6 781 aa13.71□□□□□ -0.21
TMEM54-206ENST00000482771 R3HCC1Q9Y3T6 440 aaKnown RBP13.71□□□□□ -0.21
TMEM54-206ENST00000482771 A0A0A0MRY4 1105 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 SPAARA0A1B0GVQ0 90 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 ZNF840PA6NDX5 716 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 KAT7O95251 611 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 GCNT3O95395 438 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 BMP15O95972 392 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 APODP05090 189 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 CYP17A1P05093 508 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 ENGP17813 658 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 PFKLP17858 780 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 PSMC1P62191 440 aaKnown RBP13.7□□□□□ -0.22
TMEM54-206ENST00000482771 CYP27A1Q02318 531 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 MYO1EQ12965 1108 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 SF3A1Q15459 793 aaKnown RBP13.7□□□□□ -0.22
TMEM54-206ENST00000482771 L1TD1Q5T7N2 865 aaKnown RBP13.7□□□□□ -0.22
TMEM54-206ENST00000482771 LMBRD2Q68DH5 695 aaPredicted RBP13.7□□□□□ -0.22
TMEM54-206ENST00000482771 LRSAM1Q6UWE0 723 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 VSTM1Q6UX27 236 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 DENND5BQ6ZUT9 1274 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 DPH6Q7L8W6 267 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 WHAMMQ8TF30 809 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 HMGB4Q8WW32 186 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 MYLPFQ96A32 169 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 HPDLQ96IR7 371 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 SYT15Q9BQS2 421 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 MTMR12Q9C0I1 747 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 POLMQ9NP87 494 aaPredicted RBP13.7□□□□□ -0.22
TMEM54-206ENST00000482771 ZDHHC4Q9NPG8 344 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 CRTAC1Q9NQ79 661 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 SMPD4Q9NXE4 827 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 CDH9Q9ULB4 789 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 PCDHB13Q9Y5F0 798 aa13.7□□□□□ -0.22
TMEM54-206ENST00000482771 DSPP15924 2871 aaKnown RBP13.7□□□□□ -0.22
TMEM54-206ENST00000482771 MYO18AQ92614 2054 aaKnown RBP13.7□□□□□ -0.22
TMEM54-206ENST00000482771 SLC9A3R1O14745 358 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms