RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 C3orf20Q8ND61 904 aa9.56□□□□□ -0.88
CALD1-220ENST00000482470 CDKL2Q92772 493 aa9.56□□□□□ -0.88
CALD1-220ENST00000482470 KAT2BQ92831 832 aa9.56□□□□□ -0.88
CALD1-220ENST00000482470 CDCA5Q96FF9 252 aa9.56□□□□□ -0.88
CALD1-220ENST00000482470 CPXM1Q96SM3 734 aa9.56□□□□□ -0.88
CALD1-220ENST00000482470 PAFAH2Q99487 392 aa9.56□□□□□ -0.88
CALD1-220ENST00000482470 SIK2Q9H0K1 926 aa9.56□□□□□ -0.88
CALD1-220ENST00000482470 VPS11Q9H270 941 aa9.56□□□□□ -0.88
CALD1-220ENST00000482470 TMEM134Q9H6X4 195 aa9.56□□□□□ -0.88
CALD1-220ENST00000482470 ADARB2Q9NS39 739 aaKnown RBP9.56□□□□□ -0.88
CALD1-220ENST00000482470 SLC5A4Q9NY91 659 aa9.56□□□□□ -0.88
CALD1-220ENST00000482470 KLHL8Q9P2G9 620 aaPredicted RBP9.56□□□□□ -0.88
CALD1-220ENST00000482470 MAFBQ9Y5Q3 323 aaPredicted RBP9.56□□□□□ -0.88
CALD1-220ENST00000482470 SKAP2O75563 359 aaPredicted RBP9.55□□□□□ -0.88
CALD1-220ENST00000482470 CYP2C9P11712 490 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 CYP2B6P20813 491 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 ELK3P41970 407 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 MMP13P45452 471 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 ARFIP2P53365 341 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 GEMIN4P57678 1058 aaKnown RBP9.55□□□□□ -0.88
CALD1-220ENST00000482470 ZNF200P98182 395 aaPredicted RBP9.55□□□□□ -0.88
CALD1-220ENST00000482470 SNAPC2Q13487 334 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 LAMC2Q13753 1193 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 BMPR2Q13873 1038 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 C9orf131Q5VYM1 1079 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 RWDD4Q6NW29 188 aaKnown RBP9.55□□□□□ -0.88
CALD1-220ENST00000482470 PID1Q7Z2X4 250 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 KDELC2Q7Z4H8 507 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 PHF13Q86YI8 300 aaPredicted RBP9.55□□□□□ -0.88
CALD1-220ENST00000482470 CYP4X1Q8N118 509 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 OSBPL7Q9BZF2 842 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 KIAA1551Q9HCM1 1747 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 HAO1Q9UJM8 370 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 A0A1B0GUA9 196 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 XPOTO43592 962 aaKnown RBP9.55□□□□□ -0.88
CALD1-220ENST00000482470 LSM8O95777 96 aaKnown RBP9.55□□□□□ -0.88
CALD1-220ENST00000482470 CPA2P48052 419 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 MCL1Q07820 350 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 MAP1SQ66K74 1059 aaPredicted RBP9.55□□□□□ -0.88
CALD1-220ENST00000482470 RAPH1Q70E73 1250 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 GPC2Q8N158 579 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 PDCD7Q8N8D1 485 aaKnown RBP9.55□□□□□ -0.88
CALD1-220ENST00000482470 DDX1Q92499 740 aaKnown RBP9.55□□□□□ -0.88
CALD1-220ENST00000482470 SPOCK2Q92563 424 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 FBXL18Q96ME1 805 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 HERPUD2Q9BSE4 406 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 STRA6Q9BX79 667 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 ZNF518BQ9C0D4 1074 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 PCMTD2Q9NV79 361 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 MYH4Q9Y623 1939 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 COL22A1Q8NFW1 1626 aaPredicted RBP9.55□□□□□ -0.88
CALD1-220ENST00000482470 A0A1W2PPM1 405 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 TRIM49D1C9J1S8 452 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 GPR25O00155 361 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 DNM1LO00429 736 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 AVILO75366 819 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 EIF4BP23588 611 aaKnown RBP9.55□□□□□ -0.88
CALD1-220ENST00000482470 ITKQ08881 620 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 MORF4L2Q15014 288 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 PAN2Q504Q3 1202 aaKnown RBP9.55□□□□□ -0.88
CALD1-220ENST00000482470 PRAMEF19Q5SWL8 479 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 PLEKHA7Q6IQ23 1121 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 HIPK4Q8NE63 616 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 SREK1Q8WXA9 508 aaKnown RBP9.55□□□□□ -0.88
CALD1-220ENST00000482470 L3MBTL1Q9Y468 752 aa9.55□□□□□ -0.88
CALD1-220ENST00000482470 ATP9BO43861 1147 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 DCTN3O75935 186 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 VDRP11473 427 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 KDELR1P24390 212 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 ACAT1P24752 427 aaKnown RBP9.54□□□□□ -0.88
CALD1-220ENST00000482470 ADORA2AP29274 412 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 RPA3P35244 121 aaPredicted RBP9.54□□□□□ -0.88
CALD1-220ENST00000482470 ARL1P40616 181 aaPredicted RBP9.54□□□□□ -0.88
CALD1-220ENST00000482470 EFTUD2Q15029 972 aaKnown RBP eCLIP9.54□□□□□ -0.88
CALD1-220ENST00000482470 NUDCD3Q8IVD9 361 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 UNC45BQ8IWX7 931 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 SCYL1Q96KG9 808 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 GPR20Q99678 358 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 TRIM33Q9UPN9 1127 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 SMG5Q9UPR3 1016 aaKnown RBP9.54□□□□□ -0.88
CALD1-220ENST00000482470 LTBP4Q8N2S1 1624 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 GYG2O15488 501 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 SNX3O60493 162 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 CIB2O75838 187 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 CYP1A1P04798 512 aaPredicted RBP9.54□□□□□ -0.88
CALD1-220ENST00000482470 LGALS2P05162 132 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 ADRA1DP25100 572 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 YY1P25490 414 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 RPL22P35268 128 aaKnown RBP9.54□□□□□ -0.88
CALD1-220ENST00000482470 GNL1P36915 607 aaPredicted RBP9.54□□□□□ -0.88
CALD1-220ENST00000482470 POU5F1Q01860 360 aaKnown RBP9.54□□□□□ -0.88
CALD1-220ENST00000482470 MUM1Q2TAK8 710 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 TMEM63BQ5T3F8 832 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 CRELD2Q6UXH1 353 aaPredicted RBP9.54□□□□□ -0.88
CALD1-220ENST00000482470 ZCCHC9Q8N567 271 aaKnown RBP9.54□□□□□ -0.88
CALD1-220ENST00000482470 PPFIBP2Q8ND30 876 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 TMEM237Q96Q45 408 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 FAM167BQ9BTA0 163 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 B3GNT5Q9BYG0 378 aa9.54□□□□□ -0.88
CALD1-220ENST00000482470 PCDH9Q9HC56 1237 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms