RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 SNX25Q9H3E2 840 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 GOLPH3LQ9H4A5 285 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 ARHGAP26Q9UNA1 814 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 MAGED2Q9UNF1 606 aaPredicted RBP10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 PTPRDP23468 1912 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 ANAPC1Q9H1A4 1944 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 CACNA1AO00555 2505 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 TRAV19A0A0A6YYK7 116 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 FAM92AA1XBS5 289 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 TNFRSF10BO14763 440 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 TRIM66O15016 1216 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 KINO60870 393 aaKnown RBP10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 ZNF202O95125 648 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 ASS1P00966 412 aaKnown RBP10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 USP17L7P0C7H9 530 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 HDCP19113 662 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 TGM1P22735 817 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 NRLP54845 237 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 CDH8P55286 799 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 TNNC1P63316 161 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 SLC7A9P82251 487 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 ZXDBP98169 803 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 SATB1Q01826 763 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 USP4Q13107 963 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 TRPC3Q13507 836 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 LRRC32Q14392 662 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 MDH1BQ5I0G3 518 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 SNX30Q5VWJ9 437 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 DENND5BQ6ZUT9 1274 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 SCN4BQ8IWT1 228 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 FSIP1Q8NA03 581 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 OR6B3Q8NGW1 331 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 SPATA20Q8TB22 786 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 ATRIPQ8WXE1 791 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 ZNF518BQ9C0D4 1074 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 ELOVL4Q9GZR5 314 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 DPEP3Q9H4B8 488 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 RBM12Q9NTZ6 932 aaKnown RBP10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 EHD2Q9NZN4 543 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 NXF1Q9UBU9 619 aaKnown RBP10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 DMDP11532 3685 aa10.36□□□□□ -0.75
TMEM39A-207ENST00000482162 C2orf78A6NCI8 922 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 A8MXQ7 604 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 CHURC1-FNTBB4DL54 471 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 F8VP50 259 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 TULP1O00294 542 aaPredicted RBP10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 AKAP3O75969 853 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 KIF20AO95235 890 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 OAS1P00973 400 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 ARSAP15289 507 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 GRIK1P39086 918 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 PDE6CP51160 858 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 CYP27A1Q02318 531 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 PPP2R5DQ14738 602 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 MTF1Q14872 753 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 PON2Q15165 354 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 ZNF699Q32M78 642 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 EML3Q32P44 896 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 ZNF667Q5HYK9 610 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 TRIM68Q6AZZ1 485 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 FSTL4Q6MZW2 842 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 Q6ZS52 159 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 UNC93AQ86WB7 457 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 FUKQ8N0W3 1084 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 FMR1NBQ8N0W7 255 aaPredicted RBP10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 ARL14EPQ8N8R7 260 aaPredicted RBP10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 ENGASEQ8NFI3 743 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 OSCP1Q8WVF1 389 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 DUSP9Q99956 384 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 RNF38Q9H0F5 515 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 EBF3Q9H4W6 596 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 SMYD3Q9H7B4 428 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 ECT2Q9H8V3 914 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 FBRSL1Q9HCM7 1045 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 CSNK1G1Q9HCP0 422 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 C2orf42Q9NWW7 574 aa10.35□□□□□ -0.75
TMEM39A-207ENST00000482162 CCDC163A0A0D9SF12 145 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 CLDN5O00501 218 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 HRO43593 1189 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 CALUO43852 315 aaPredicted RBP10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 PHACTR2O75167 634 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 ZDHHC11BP0C7U3 371 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 CNR2P34972 360 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 GJA4P35212 333 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 ASPAP45381 313 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 GALK1P51570 392 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 VAMP7P51809 220 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 AMPD2Q01433 879 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 PPP3CAQ08209 521 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 INCA1Q0VD86 236 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 TAF10Q12962 218 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 GAB4Q2WGN9 574 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 EDRF1Q3B7T1 1238 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 COBLL1Q53SF7 1204 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 INTS8Q75QN2 995 aaKnown RBP10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 NUP93Q8N1F7 819 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 TTC8Q8TAM2 541 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 SH3RF2Q8TEC5 729 aa10.34□□□□□ -0.75
TMEM39A-207ENST00000482162 OVCA2Q8WZ82 227 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms