RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 NOMO2Q5JPE7 1267 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 EFHC1Q5JVL4 640 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 C1orf53Q5VUE5 145 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 DRICH1Q6PGQ1 229 aaPredicted RBP12.29□□□□□ -0.44
GGPS1-205ENST00000482013 CCDC137Q6PK04 289 aaKnown RBP12.29□□□□□ -0.44
GGPS1-205ENST00000482013 CD300LGQ6UXG3 332 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 ANKRD33Q7Z3H0 272 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 VSIG1Q86XK7 387 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 CCDC50Q8IVM0 306 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 RNF169Q8NCN4 708 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 SLC2A14Q8TDB8 520 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 RXFP2Q8WXD0 754 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 CASKIN2Q8WXE0 1202 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 SEPT8Q92599 483 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 SUSD3Q96L08 255 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 TOX2Q96NM4 488 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 DEFB118Q96PH6 123 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 SLITRK1Q96PX8 696 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 SYT15Q9BQS2 421 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 ERP44Q9BS26 406 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 FRMD8P1Q9BZ68 369 aaPredicted RBP12.29□□□□□ -0.44
GGPS1-205ENST00000482013 DCLK3Q9C098 648 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 RNF208Q9H0X6 261 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 WBP1LQ9NX94 342 aa12.29□□□□□ -0.44
GGPS1-205ENST00000482013 TSC2P49815 1807 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 CASTOR2A6NHX0 329 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 ENPP3O14638 875 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 TTI1O43156 1089 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 PAPSS1O43252 624 aaPredicted RBP12.28□□□□□ -0.44
GGPS1-205ENST00000482013 LRCH4O75427 683 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 ZMYND10O75800 440 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 FBXO21O94952 628 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 TRUB2O95900 331 aaKnown RBP12.28□□□□□ -0.44
GGPS1-205ENST00000482013 KRT1P04264 644 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 MYBL2P10244 700 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 CCDC130P13994 396 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 NPR3P17342 541 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 ADORA2BP29275 332 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 CARSP49589 748 aaKnown RBP12.28□□□□□ -0.44
GGPS1-205ENST00000482013 RGS7P49802 495 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 SLC25A11Q02978 314 aaKnown RBP12.28□□□□□ -0.44
GGPS1-205ENST00000482013 SMC1AQ14683 1233 aaKnown RBP12.28□□□□□ -0.44
GGPS1-205ENST00000482013 CASP8Q14790 479 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 TAZQ16635 292 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 BOLA3Q53S33 107 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 TFDP3Q5H9I0 405 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 DUPD1Q68J44 220 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 SPOCD1Q6ZMY3 1216 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 JAMLQ86YT9 394 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 CCDC105Q8IYK2 499 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 ZDHHC14Q8IZN3 488 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 FUKQ8N0W3 1084 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 KRT222Q8N1A0 295 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 THEM5Q8N1Q8 247 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 SCML4Q8N228 414 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 MREGQ8N565 214 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 TTC13Q8NBP0 860 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 C3orf58Q8NDZ4 430 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 CMASQ8NFW8 434 aaPredicted RBP12.28□□□□□ -0.44
GGPS1-205ENST00000482013 ATL2Q8NHH9 583 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 MYCBPAPQ8TBZ2 947 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 TEKT4Q8WW24 435 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 LINC01599Q8WXQ3 324 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 KHSRPQ92945 711 aaKnown RBP eCLIP12.28□□□□□ -0.44
GGPS1-205ENST00000482013 PKNOX2Q96KN3 472 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 TBCBQ99426 244 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 DDX23Q9BUQ8 820 aaKnown RBP12.28□□□□□ -0.44
GGPS1-205ENST00000482013 CRISPLD2Q9H0B8 497 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 PCDHB8Q9UN66 801 aa12.28□□□□□ -0.44
GGPS1-205ENST00000482013 DCDC2CA8MYV0 355 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 ZNF487B1APH4 448 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 TULP2O00295 520 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 TRAPPC3O43617 180 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 NBNO60934 754 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 GABBR2O75899 941 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 B3GAT3O94766 335 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 ECEL1O95672 775 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 FAM200BP0CF97 657 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 RALAP11233 206 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 MIPP30301 263 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 SDC4P31431 198 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 CDKN2BP42772 138 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 MTFR1Q15390 333 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 ZFYVE27Q5T4F4 411 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 FAM171BQ6P995 826 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 SLC39A5Q6ZMH5 540 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 PAQR9Q6ZVX9 377 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 ADAT2Q7Z6V5 191 aaKnown RBP12.27□□□□□ -0.45
GGPS1-205ENST00000482013 ARFGAP1Q8N6T3 406 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 EMC1Q8N766 993 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 IFT81Q8WYA0 676 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 CENPIQ92674 756 aaPredicted RBP12.27□□□□□ -0.45
GGPS1-205ENST00000482013 FAM193BQ96PV7 902 aaPredicted RBP12.27□□□□□ -0.45
GGPS1-205ENST00000482013 MED10Q9BTT4 135 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 B3GNT5Q9BYG0 378 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 CRTAC1Q9NQ79 661 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 USP18Q9UMW8 372 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 DRG1Q9Y295 367 aaKnown RBP12.27□□□□□ -0.45
GGPS1-205ENST00000482013 INPP5FQ9Y2H2 1132 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 PCDHB7Q9Y5E2 793 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms