RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 ATF6P18850 670 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 POLR2BP30876 1174 aaKnown RBP9.69□□□□□ -0.86
HLA-B-253ENST00000481849 ABCD1P33897 745 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 TXLNAP40222 546 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 STAT6P42226 847 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 GPR15P49685 360 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 CASP5P51878 434 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 USP4Q13107 963 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 RESTQ13127 1097 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 CUL4AQ13619 759 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 ARHGAP15Q53QZ3 475 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 SCARA3Q6AZY7 606 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 TXNDC11Q6PKC3 985 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 LRRTM3Q86VH5 581 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 SYCP3Q8IZU3 236 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 PGBD3Q8N328 593 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 TTC16Q8NEE8 873 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 DOCK8Q8NF50 2099 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 E2F7Q96AV8 911 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 GCNAQ96QF7 691 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 ACCSQ96QU6 501 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 MKNK1Q9BUB5 465 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 CHRDQ9H2X0 955 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 ST6GALNAC4Q9H4F1 302 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 PCIF1Q9H4Z3 704 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 PRMT8Q9NR22 394 aaPredicted RBP9.69□□□□□ -0.86
HLA-B-253ENST00000481849 DSEQ9UL01 958 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 AGAP1Q9UPQ3 857 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 SMG5Q9UPR3 1016 aaKnown RBP9.69□□□□□ -0.86
HLA-B-253ENST00000481849 MTCL1Q9Y4B5 1905 aaKnown RBP9.69□□□□□ -0.86
HLA-B-253ENST00000481849 ASB3Q9Y575 518 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 SRPRBQ9Y5M8 271 aaKnown RBP9.69□□□□□ -0.86
HLA-B-253ENST00000481849 STYXL1Q9Y6J8 313 aa9.69□□□□□ -0.86
HLA-B-253ENST00000481849 C2CD3Q4AC94 2353 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 A0A087X0B3 334 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 A0A1B0GTH6 734 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 SPECC1L-ADORA2AF8WAN1 911 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 TAF4O00268 1085 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 ARNTLO00327 626 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 CHADO15335 359 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 IL18RAPO95256 599 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 FGF19O95750 216 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 ITGB3P05106 788 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 KRT19P08727 400 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 CHRNB1P11230 501 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 GAP43P17677 238 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 PDCP20941 246 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 SYT1P21579 422 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 PAX3P23760 479 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 ACAT1P24752 427 aaKnown RBP9.68□□□□□ -0.86
HLA-B-253ENST00000481849 TUFMP49411 452 aaKnown RBP9.68□□□□□ -0.86
HLA-B-253ENST00000481849 SATB1Q01826 763 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 TNK2Q07912 1038 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 FCHO2Q0JRZ9 810 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 BFSP1Q12934 665 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 POSTNQ15063 836 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 PON2Q15165 354 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 SV2CQ496J9 727 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 L1TD1Q5T7N2 865 aaKnown RBP9.68□□□□□ -0.86
HLA-B-253ENST00000481849 SDHAF4Q5VUM1 108 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 HEATR6Q6AI08 1181 aaKnown RBP9.68□□□□□ -0.86
HLA-B-253ENST00000481849 Q6ZS52 159 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 PDILTQ8N807 584 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 ZBTB44Q8NCP5 570 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 HVCN1Q96D96 273 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 DNAJC19Q96DA6 116 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 BORCS6Q96GS4 357 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 USP28Q96RU2 1077 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 PI4K2AQ9BTU6 479 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 TRPV5Q9NQA5 729 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 TMLHEQ9NVH6 421 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 RBAKQ9NYW8 714 aaPredicted RBP9.68□□□□□ -0.86
HLA-B-253ENST00000481849 GTSE1Q9NYZ3 720 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 USP18Q9UMW8 372 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 MAGED2Q9UNF1 606 aaPredicted RBP9.68□□□□□ -0.86
HLA-B-253ENST00000481849 EXOC7Q9UPT5 735 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 MYH15Q9Y2K3 1946 aa9.68□□□□□ -0.86
HLA-B-253ENST00000481849 UBR5O95071 2799 aaPredicted RBP9.67□□□□□ -0.86
HLA-B-253ENST00000481849 NOTCH4Q99466 2003 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 HCRTO43612 131 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 LILRB5O75023 590 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 PRPF40AO75400 957 aaKnown RBP9.67□□□□□ -0.86
HLA-B-253ENST00000481849 PRPF6O94906 941 aaKnown RBP9.67□□□□□ -0.86
HLA-B-253ENST00000481849 HAPLN1P10915 354 aaPredicted RBP9.67□□□□□ -0.86
HLA-B-253ENST00000481849 CDC25CP30307 473 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 HOXC13P31276 330 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 MAP2K3P46734 347 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 CXCL12P48061 93 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 CCR3P51677 355 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 TSPY1Q01534 308 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 SRSF5Q13243 272 aaKnown RBP9.67□□□□□ -0.86
HLA-B-253ENST00000481849 LRRC32Q14392 662 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 PPP2R5DQ14738 602 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 CCDC142Q17RM4 750 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 ARHGAP29Q52LW3 1261 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 LMBRD2Q68DH5 695 aaPredicted RBP9.67□□□□□ -0.86
HLA-B-253ENST00000481849 CCDC73Q6ZRK6 1079 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 BRSK2Q8IWQ3 736 aa9.67□□□□□ -0.86
HLA-B-253ENST00000481849 DCP1BQ8IZD4 617 aaKnown RBP9.67□□□□□ -0.86
HLA-B-253ENST00000481849 PDCL2Q8N4E4 241 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms